HEADSC 1jxp COMMNT S2C correlation file created: Sat Dec 27 17:48:16 EST 2003 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A A ALA --- 1 - - - 367 SEQCRD A P PRO --- 2 - - - 367 SEQCRD A I ILE ILE 3 3 C C - SEQCRD A T THR THR 4 4 C C - SEQCRD A A ALA ALA 5 5 C C - SEQCRD A Y TYR TYR 6 6 C E 5 SEQCRD A S SER SER 7 7 C E 5 SEQCRD A Q GLN GLN 8 8 C E 5 SEQCRD A Q GLN GLN 9 9 C E 5 SEQCRD A T THR THR 10 10 C C - SEQCRD A R ARG ARG 11 11 C C - SEQCRD A G GLY GLY 12 12 C C - SEQCRD A L LEU LEU 13 13 H H - SEQCRD A L LEU LEU 14 14 H H - SEQCRD A G GLY GLY 15 15 H H - SEQCRD A C CYS CYS 16 16 H H - SEQCRD A I ILE ILE 17 17 H H - SEQCRD A I ILE ILE 18 18 H H - SEQCRD A T THR THR 19 19 H H - SEQCRD A S SER SER 20 20 H H - SEQCRD A L LEU LEU 21 21 H H - SEQCRD A T THR THR 22 22 C H 5 SEQCRD A G GLY GLY 23 23 C C - SEQCRD A R ARG ARG 24 24 C B 5 SEQCRD A D ASP ASP 25 25 C C - SEQCRD A K LYS LYS 26 26 C C - SEQCRD A N ASN ASN 27 27 C C - SEQCRD A Q GLN GLN 28 28 C C - SEQCRD A V VAL VAL 29 29 C C - SEQCRD A E GLU GLU 30 30 C C - SEQCRD A G GLY GLY 31 31 C C - SEQCRD A E GLU GLU 32 32 C C - SEQCRD A V VAL VAL 33 33 E E - SEQCRD A Q GLN GLN 34 34 E E - SEQCRD A V VAL VAL 35 35 E E - SEQCRD A V VAL VAL 36 36 E E - SEQCRD A S SER SER 37 37 E E - SEQCRD A T THR THR 38 38 C E 5 SEQCRD A A ALA ALA 39 39 C T 5 SEQCRD A T THR THR 40 40 C T 5 SEQCRD A Q GLN GLN 41 41 C E 5 SEQCRD A S SER SER 42 42 E E - SEQCRD A F PHE PHE 43 43 E E - SEQCRD A L LEU LEU 44 44 E E - SEQCRD A A ALA ALA 45 45 E E - SEQCRD A T THR THR 46 46 E E - SEQCRD A C CYS CYS 47 47 E E - SEQCRD A V VAL VAL 48 48 E E - SEQCRD A N ASN ASN 49 49 C T 5 SEQCRD A G GLY GLY 50 50 C T 5 SEQCRD A V VAL VAL 51 51 E E - SEQCRD A C CYS CYS 52 52 E E - SEQCRD A W TRP TRP 53 53 E E - SEQCRD A T THR THR 54 54 E E - SEQCRD A V VAL VAL 55 55 E E - SEQCRD A Y TYR TYR 56 56 H H - SEQCRD A H HIS HIS 57 57 H H - SEQCRD A G GLY GLY 58 58 H H - SEQCRD A A ALA ALA 59 59 H H - SEQCRD A G GLY GLY 60 60 C T 5 SEQCRD A S SER SER 61 61 C T 5 SEQCRD A K LYS LYS 62 62 C T 5 SEQCRD A T THR THR 63 63 C C - SEQCRD A L LEU LEU 64 64 E E - SEQCRD A A ALA ALA 65 65 E E - SEQCRD A G GLY GLY 66 66 E E - SEQCRD A P PRO PRO 67 67 C T 5 SEQCRD A K LYS LYS 68 68 C T 5 SEQCRD A G GLY GLY 69 69 E E - SEQCRD A P PRO PRO 70 70 E E - SEQCRD A I ILE ILE 71 71 E E - SEQCRD A T THR THR 72 72 C C - SEQCRD A Q GLN GLN 73 73 E E - SEQCRD A M MET MET 74 74 E E - SEQCRD A Y TYR TYR 75 75 E E - SEQCRD A T THR THR 76 76 E E - SEQCRD A N ASN ASN 77 77 E E - SEQCRD A V VAL VAL 78 78 C T 5 SEQCRD A D ASP ASP 79 79 C T 5 SEQCRD A Q GLN GLN 80 80 C T 5 SEQCRD A D ASP ASP 81 81 C T 5 SEQCRD A L LEU LEU 82 82 E E - SEQCRD A V VAL VAL 83 83 E E - SEQCRD A G GLY GLY 84 84 E E - SEQCRD A W TRP TRP 85 85 E E - SEQCRD A Q GLN GLN 86 86 E E - SEQCRD A A ALA ALA 87 87 C C - SEQCRD A P PRO PRO 88 88 C T 5 SEQCRD A P PRO PRO 89 89 C T 5 SEQCRD A G GLY GLY 90 90 C T 5 SEQCRD A A ALA ALA 91 91 C T 5 SEQCRD A R ARG ARG 92 92 C C - SEQCRD A S SER SER 93 93 C C - SEQCRD A L LEU LEU 94 94 C B 5 SEQCRD A T THR THR 95 95 C C - SEQCRD A P PRO PRO 96 96 C C - SEQCRD A C CYS CYS 97 97 C C - SEQCRD A T THR THR 98 98 C C - SEQCRD A C CYS CYS 99 99 C C - SEQCRD A G GLY GLY 100 100 C C - SEQCRD A S SER SER 101 101 C C - SEQCRD A S SER SER 102 102 C C - SEQCRD A D ASP ASP 103 103 E E - SEQCRD A L LEU LEU 104 104 E E - SEQCRD A Y TYR TYR 105 105 E E - SEQCRD A L LEU LEU 106 106 E E - SEQCRD A V VAL VAL 107 107 E E - SEQCRD A T THR THR 108 108 C E 5 SEQCRD A R ARG ARG 109 109 C T 5 SEQCRD A H HIS HIS 110 110 C T 5 SEQCRD A A ALA ALA 111 111 C T 5 SEQCRD A D ASP ASP 112 112 C E 5 SEQCRD A V VAL VAL 113 113 E E - SEQCRD A I ILE ILE 114 114 E E - SEQCRD A P PRO PRO 115 115 E E - SEQCRD A V VAL VAL 116 116 E E - SEQCRD A R ARG ARG 117 117 E E - SEQCRD A R ARG ARG 118 118 E E - SEQCRD A R ARG ARG 119 119 C C - SEQCRD A G GLY GLY 120 120 C T 5 SEQCRD A D ASP ASP 121 121 C T 5 SEQCRD A S SER SER 122 122 C T 5 SEQCRD A R ARG ARG 123 123 E E - SEQCRD A G GLY GLY 124 124 E E - SEQCRD A S SER SER 125 125 E E - SEQCRD A L LEU LEU 126 126 E E - SEQCRD A L LEU LEU 127 127 C T 5 SEQCRD A S SER SER 128 128 C T 5 SEQCRD A P PRO PRO 129 129 C T 5 SEQCRD A R ARG ARG 130 130 C C - SEQCRD A P PRO PRO 131 131 C B 5 SEQCRD A V VAL VAL 132 132 H G 5 SEQCRD A S SER SER 133 133 H G 5 SEQCRD A Y TYR TYR 134 134 H G 5 SEQCRD A L LEU LEU 135 135 H G 5 SEQCRD A K LYS LYS 136 136 C T 5 SEQCRD A G GLY GLY 137 137 C T 5 SEQCRD A S SER SER 138 138 C T 5 SEQCRD A S SER SER 139 139 C T 5 SEQCRD A G GLY GLY 140 140 C T 5 SEQCRD A G GLY GLY 141 141 C E 5 SEQCRD A P PRO PRO 142 142 E E - SEQCRD A L LEU LEU 143 143 E E - SEQCRD A L LEU LEU 144 144 E E - SEQCRD A C CYS CYS 145 145 E E - SEQCRD A P PRO PRO 146 146 C T 5 SEQCRD A S SER SER 147 147 C T 5 SEQCRD A G GLY GLY 148 148 C T 5 SEQCRD A H HIS HIS 149 149 E E - SEQCRD A A ALA ALA 150 150 E E - SEQCRD A V VAL VAL 151 151 E E - SEQCRD A G GLY GLY 152 152 E E - SEQCRD A I ILE ILE 153 153 E E - SEQCRD A F PHE PHE 154 154 E E - SEQCRD A R ARG ARG 155 155 E E - SEQCRD A A ALA ALA 156 156 E E - SEQCRD A A ALA ALA 157 157 E E - SEQCRD A V VAL VAL 158 158 E E - SEQCRD A C CYS CYS 159 159 C E 5 SEQCRD A T THR THR 160 160 C E 5 SEQCRD A R ARG ARG 161 161 C T 5 SEQCRD A G GLY GLY 162 162 C T 5 SEQCRD A V VAL VAL 163 163 C E 5 SEQCRD A A ALA ALA 164 164 C E 5 SEQCRD A K LYS LYS 165 165 C E 5 SEQCRD A A ALA ALA 166 166 E E - SEQCRD A V VAL VAL 167 167 E E - SEQCRD A D ASP ASP 168 168 E E - SEQCRD A F PHE PHE 169 169 E E - SEQCRD A V VAL VAL 170 170 E E - SEQCRD A P PRO PRO 171 171 E E - SEQCRD A V VAL VAL 172 172 H H - SEQCRD A E GLU GLU 173 173 H H - SEQCRD A S SER SER 174 174 H H - SEQCRD A M MET MET 175 175 H H - SEQCRD A E GLU GLU 176 176 H H - SEQCRD A T THR THR 177 177 C H 5 SEQCRD A T THR THR 178 178 C C - SEQCRD A M MET MET 179 179 C C - SEQCRD A R ARG --- 180 - - - 367 SEQCRD A A ALA --- 181 - - - 367 SEQCRD A S SER --- 182 - - - 367 SEQCRD A K LYS --- 183 - - - 367 SEQCRD A K LYS --- 184 - - - 367 SEQCRD A K LYS --- 185 - - - 367 SEQCRD A K LYS --- 186 - - - 367 SEQCRD B A ALA --- 1 - - - 367 SEQCRD B P PRO --- 2 - - - 367 SEQCRD B I ILE ILE 3 3 C C - SEQCRD B T THR THR 4 4 C C - SEQCRD B A ALA ALA 5 5 C E 5 SEQCRD B Y TYR TYR 6 6 C E 5 SEQCRD B S SER SER 7 7 C E 5 SEQCRD B Q GLN GLN 8 8 C E 5 SEQCRD B Q GLN GLN 9 9 C E 5 SEQCRD B T THR THR 10 10 C C - SEQCRD B R ARG ARG 11 11 C C - SEQCRD B G GLY GLY 12 12 C C - SEQCRD B L LEU LEU 13 13 H H - SEQCRD B L LEU LEU 14 14 H H - SEQCRD B G GLY GLY 15 15 H H - SEQCRD B C CYS CYS 16 16 H H - SEQCRD B I ILE ILE 17 17 H H - SEQCRD B I ILE ILE 18 18 H H - SEQCRD B T THR THR 19 19 H H - SEQCRD B S SER SER 20 20 H H - SEQCRD B L LEU LEU 21 21 H H - SEQCRD B T THR THR 22 22 C H 5 SEQCRD B G GLY GLY 23 23 C C - SEQCRD B R ARG ARG 24 24 C B 5 SEQCRD B D ASP ASP 25 25 C C - SEQCRD B K LYS LYS 26 26 C C - SEQCRD B N ASN ASN 27 27 C C - SEQCRD B Q GLN GLN 28 28 C C - SEQCRD B V VAL VAL 29 29 C C - SEQCRD B E GLU GLU 30 30 C C - SEQCRD B G GLY GLY 31 31 C C - SEQCRD B E GLU GLU 32 32 C C - SEQCRD B V VAL VAL 33 33 E E - SEQCRD B Q GLN GLN 34 34 E E - SEQCRD B V VAL VAL 35 35 E E - SEQCRD B V VAL VAL 36 36 E E - SEQCRD B S SER SER 37 37 E E - SEQCRD B T THR THR 38 38 C T 5 SEQCRD B A ALA ALA 39 39 C T 5 SEQCRD B T THR THR 40 40 C T 5 SEQCRD B Q GLN GLN 41 41 C T 5 SEQCRD B S SER SER 42 42 E E - SEQCRD B F PHE PHE 43 43 E E - SEQCRD B L LEU LEU 44 44 E E - SEQCRD B A ALA ALA 45 45 E E - SEQCRD B T THR THR 46 46 E E - SEQCRD B C CYS CYS 47 47 E E - SEQCRD B V VAL VAL 48 48 E E - SEQCRD B N ASN ASN 49 49 C T 5 SEQCRD B G GLY GLY 50 50 C T 5 SEQCRD B V VAL VAL 51 51 E E - SEQCRD B C CYS CYS 52 52 E E - SEQCRD B W TRP TRP 53 53 E E - SEQCRD B T THR THR 54 54 E E - SEQCRD B V VAL VAL 55 55 E E - SEQCRD B Y TYR TYR 56 56 H H - SEQCRD B H HIS HIS 57 57 H H - SEQCRD B G GLY GLY 58 58 H H - SEQCRD B A ALA ALA 59 59 H H - SEQCRD B G GLY GLY 60 60 C T 5 SEQCRD B S SER SER 61 61 C T 5 SEQCRD B K LYS LYS 62 62 C T 5 SEQCRD B T THR THR 63 63 C C - SEQCRD B L LEU LEU 64 64 C E 5 SEQCRD B A ALA ALA 65 65 C E 5 SEQCRD B G GLY GLY 66 66 C E 5 SEQCRD B P PRO PRO 67 67 C T 5 SEQCRD B K LYS LYS 68 68 C T 5 SEQCRD B G GLY GLY 69 69 C E 5 SEQCRD B P PRO PRO 70 70 C E 5 SEQCRD B I ILE ILE 71 71 C E 5 SEQCRD B T THR THR 72 72 C C - SEQCRD B Q GLN GLN 73 73 C C - SEQCRD B M MET MET 74 74 C C - SEQCRD B Y TYR TYR 75 75 C E 5 SEQCRD B T THR THR 76 76 C E 5 SEQCRD B N ASN ASN 77 77 C E 5 SEQCRD B V VAL VAL 78 78 H G 5 SEQCRD B D ASP ASP 79 79 H G 5 SEQCRD B Q GLN GLN 80 80 H G 5 SEQCRD B D ASP ASP 81 81 C C - SEQCRD B L LEU LEU 82 82 E E - SEQCRD B V VAL VAL 83 83 E E - SEQCRD B G GLY GLY 84 84 E E - SEQCRD B W TRP TRP 85 85 E E - SEQCRD B Q GLN GLN 86 86 E E - SEQCRD B A ALA ALA 87 87 C C - SEQCRD B P PRO PRO 88 88 C T 5 SEQCRD B P PRO PRO 89 89 C T 5 SEQCRD B G GLY GLY 90 90 C T 5 SEQCRD B A ALA ALA 91 91 C T 5 SEQCRD B R ARG ARG 92 92 C C - SEQCRD B S SER SER 93 93 C C - SEQCRD B L LEU LEU 94 94 C B 5 SEQCRD B T THR THR 95 95 C C - SEQCRD B P PRO PRO 96 96 C C - SEQCRD B C CYS CYS 97 97 C C - SEQCRD B T THR THR 98 98 C C - SEQCRD B C CYS CYS 99 99 C C - SEQCRD B G GLY GLY 100 100 C C - SEQCRD B S SER SER 101 101 C C - SEQCRD B S SER SER 102 102 C C - SEQCRD B D ASP ASP 103 103 E E - SEQCRD B L LEU LEU 104 104 E E - SEQCRD B Y TYR TYR 105 105 E E - SEQCRD B L LEU LEU 106 106 E E - SEQCRD B V VAL VAL 107 107 E E - SEQCRD B T THR THR 108 108 C E 5 SEQCRD B R ARG ARG 109 109 C T 5 SEQCRD B H HIS HIS 110 110 C T 5 SEQCRD B A ALA ALA 111 111 C T 5 SEQCRD B D ASP ASP 112 112 C E 5 SEQCRD B V VAL VAL 113 113 E E - SEQCRD B I ILE ILE 114 114 E E - SEQCRD B P PRO PRO 115 115 E E - SEQCRD B V VAL VAL 116 116 E E - SEQCRD B R ARG ARG 117 117 E E - SEQCRD B R ARG ARG 118 118 E E - SEQCRD B R ARG ARG 119 119 C C - SEQCRD B G GLY GLY 120 120 C T 5 SEQCRD B D ASP ASP 121 121 C T 5 SEQCRD B S SER SER 122 122 C T 5 SEQCRD B R ARG ARG 123 123 E E - SEQCRD B G GLY GLY 124 124 E E - SEQCRD B S SER SER 125 125 E E - SEQCRD B L LEU LEU 126 126 E E - SEQCRD B L LEU LEU 127 127 C E 5 SEQCRD B S SER SER 128 128 C E 5 SEQCRD B P PRO PRO 129 129 C E 5 SEQCRD B R ARG ARG 130 130 C E 5 SEQCRD B P PRO PRO 131 131 C E 5 SEQCRD B V VAL VAL 132 132 C G 5 SEQCRD B S SER SER 133 133 C G 5 SEQCRD B Y TYR TYR 134 134 C G 5 SEQCRD B L LEU LEU 135 135 C G 5 SEQCRD B K LYS LYS 136 136 C T 5 SEQCRD B G GLY GLY 137 137 C T 5 SEQCRD B S SER SER 138 138 C T 5 SEQCRD B S SER SER 139 139 C T 5 SEQCRD B G GLY GLY 140 140 C T 5 SEQCRD B G GLY GLY 141 141 C E 5 SEQCRD B P PRO PRO 142 142 E E - SEQCRD B L LEU LEU 143 143 E E - SEQCRD B L LEU LEU 144 144 E E - SEQCRD B C CYS CYS 145 145 C T 5 SEQCRD B P PRO PRO 146 146 C T 5 SEQCRD B S SER SER 147 147 C T 5 SEQCRD B G GLY GLY 148 148 C T 5 SEQCRD B H HIS HIS 149 149 C C - SEQCRD B A ALA ALA 150 150 E E - SEQCRD B V VAL VAL 151 151 E E - SEQCRD B G GLY GLY 152 152 E E - SEQCRD B I ILE ILE 153 153 E E - SEQCRD B F PHE PHE 154 154 E E - SEQCRD B R ARG ARG 155 155 E E - SEQCRD B A ALA ALA 156 156 E E - SEQCRD B A ALA ALA 157 157 E E - SEQCRD B V VAL VAL 158 158 E E - SEQCRD B C CYS CYS 159 159 C E 5 SEQCRD B T THR THR 160 160 C E 5 SEQCRD B R ARG ARG 161 161 C T 5 SEQCRD B G GLY GLY 162 162 C T 5 SEQCRD B V VAL VAL 163 163 C E 5 SEQCRD B A ALA ALA 164 164 C E 5 SEQCRD B K LYS LYS 165 165 C E 5 SEQCRD B A ALA ALA 166 166 E E - SEQCRD B V VAL VAL 167 167 E E - SEQCRD B D ASP ASP 168 168 E E - SEQCRD B F PHE PHE 169 169 E E - SEQCRD B V VAL VAL 170 170 E E - SEQCRD B P PRO PRO 171 171 E E - SEQCRD B V VAL VAL 172 172 H H - SEQCRD B E GLU GLU 173 173 H H - SEQCRD B S SER SER 174 174 H H - SEQCRD B M MET MET 175 175 H H - SEQCRD B E GLU GLU 176 176 H H - SEQCRD B T THR THR 177 177 H H - SEQCRD B T THR THR 178 178 C H 5 SEQCRD B M MET MET 179 179 C C - SEQCRD B R ARG --- 180 - - - 367 SEQCRD B A ALA --- 181 - - - 367 SEQCRD B S SER --- 182 - - - 367 SEQCRD B K LYS --- 183 - - - 367 SEQCRD B K LYS --- 184 - - - 367 SEQCRD B K LYS --- 185 - - - 367 SEQCRD B K LYS --- 186 - - - 367 SEQCRD C K LYS --- 1 - - - 367 SEQCRD C G GLY GLY 2 221 C C 4 SEQCRD C S SER SER 3 222 C C 4 SEQCRD C V VAL VAL 4 223 C B 45 SEQCRD C V VAL VAL 5 224 C E 45 SEQCRD C I ILE ILE 6 225 C E 45 SEQCRD C V VAL VAL 7 226 C E 45 SEQCRD C G GLY GLY 8 227 C E 45 SEQCRD C R ARG ARG 9 228 C E 45 SEQCRD C I ILE ILE 10 229 C E 45 SEQCRD C I ILE ILE 11 230 C E 45 SEQCRD C L LEU LEU 12 231 C C 4 SEQCRD C S SER SER 13 232 C C 4 SEQCRD C G GLY --- 14 - - - 367 SEQCRD C R ARG --- 15 - - - 367 SEQCRD C K LYS --- 16 - - - 367 SEQCRD D K LYS --- 1 - - - 367 SEQCRD D G GLY GLY 2 221 C C 4 SEQCRD D S SER SER 3 222 C C 4 SEQCRD D V VAL VAL 4 223 C B 45 SEQCRD D V VAL VAL 5 224 C E 45 SEQCRD D I ILE ILE 6 225 C E 45 SEQCRD D V VAL VAL 7 226 C E 45 SEQCRD D G GLY GLY 8 227 C E 45 SEQCRD D R ARG ARG 9 228 C E 45 SEQCRD D I ILE ILE 10 229 C E 45 SEQCRD D I ILE ILE 11 230 C E 45 SEQCRD D L LEU LEU 12 231 C E 45 SEQCRD D S SER SER 13 232 C C 4 SEQCRD D G GLY --- 14 - - - 367 SEQCRD D R ARG --- 15 - - - 367 SEQCRD D K LYS --- 16 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 26 No ATOM record S2CERR 4 24 SEQRES and ATOM residue numbers differ S2CERR 5 146 PDB and STRIDE secondary structures differ S2CERR 6 26 PDB secondary structure is absent S2CERR 7 26 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.2 PARAME R-factor 0.245 PARAME B-factor ? COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: POLG_HCVJT (Q00269) COMMNT DATABA mutation: DATABA SER A 122 --> GLY 1148 CONFLICT DATABA TYR B 56 --> PHE 1082 CONFLICT DATABA SER A 7 --> ALA 1033 CONFLICT DATABA VAL A 170 --> ILE 1196 CONFLICT DATABA TYR A 56 --> PHE 1082 CONFLICT DATABA SER B 122 --> GLY 1148 CONFLICT DATABA GLN B 86 --> HIS 1112 CONFLICT DATABA ILE B 18 --> VAL 1044 CONFLICT DATABA VAL B 170 --> ILE 1196 CONFLICT DATABA SER B 7 --> ALA 1033 CONFLICT DATABA GLN A 86 --> HIS 1112 CONFLICT DATABA ILE A 18 --> VAL 1044 CONFLICT