HEADSC 1lay COMMNT S2C correlation file created: Sat Dec 27 20:38:48 EST 2003 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD 0 M MET --- 1 - - - 367 SEQCRD 0 T THR --- 2 - - - 367 SEQCRD 0 M MET --- 3 - - - 367 SEQCRD 0 D ASP --- 4 - - - 367 SEQCRD 0 E GLU --- 5 - - - 367 SEQCRD 0 Q GLN --- 6 - - - 367 SEQCRD 0 Q GLN --- 7 - - - 367 SEQCRD 0 S SER --- 8 - - - 367 SEQCRD 0 Q GLN GLN 9 9 C T 5 SEQCRD 0 A ALA ALA 10 10 C T 5 SEQCRD 0 V VAL VAL 11 11 C T 5 SEQCRD 0 A ALA ALA 12 12 C T 5 SEQCRD 0 P PRO PRO 13 13 E C 5 SEQCRD 0 V VAL VAL 14 14 E E - SEQCRD 0 Y TYR TYR 15 15 E E - SEQCRD 0 V VAL VAL 16 16 E E - SEQCRD 0 G GLY GLY 17 17 E E - SEQCRD 0 G GLY GLY 18 18 E E - SEQCRD 0 F PHE PHE 19 19 E E - SEQCRD 0 L LEU LEU 20 20 E E - SEQCRD 0 A ALA ALA 21 21 C E 5 SEQCRD 0 R ARG ARG 22 22 C E 5 SEQCRD 0 Y TYR TYR 23 23 C C - SEQCRD 0 D ASP ASP 24 24 C C - SEQCRD 0 Q GLN --- 25 - - - 367 SEQCRD 0 S SER --- 26 - - - 367 SEQCRD 0 P PRO --- 27 - - - 367 SEQCRD 0 D ASP --- 28 - - - 367 SEQCRD 0 E GLU --- 29 - - - 367 SEQCRD 0 A ALA --- 30 - - - 367 SEQCRD 0 E GLU --- 31 - - - 367 SEQCRD 0 L LEU --- 32 - - - 367 SEQCRD 0 L LEU --- 33 - - - 367 SEQCRD 0 L LEU --- 34 - - - 367 SEQCRD 0 P PRO --- 35 - - - 367 SEQCRD 0 R ARG --- 36 - - - 367 SEQCRD 0 D ASP --- 37 - - - 367 SEQCRD 0 V VAL --- 38 - - - 367 SEQCRD 0 V VAL --- 39 - - - 367 SEQCRD 0 E GLU --- 40 - - - 367 SEQCRD 0 H HIS --- 41 - - - 367 SEQCRD 0 W TRP --- 42 - - - 367 SEQCRD 0 L LEU --- 43 - - - 367 SEQCRD 0 H HIS --- 44 - - - 367 SEQCRD 0 A ALA --- 45 - - - 367 SEQCRD 0 Q GLN --- 46 - - - 367 SEQCRD 0 G GLY --- 47 - - - 367 SEQCRD 0 Q GLN --- 48 - - - 367 SEQCRD 0 G GLY --- 49 - - - 367 SEQCRD 0 Q GLN --- 50 - - - 367 SEQCRD 0 P PRO --- 51 - - - 367 SEQCRD 0 S SER --- 52 - - - 367 SEQCRD 0 L LEU --- 53 - - - 367 SEQCRD 0 S SER --- 54 - - - 367 SEQCRD 0 V VAL --- 55 - - - 367 SEQCRD 0 A ALA ALA 56 56 C C - SEQCRD 0 L LEU LEU 57 57 C C - SEQCRD 0 P PRO PRO 58 58 E E - SEQCRD 0 L LEU LEU 59 59 E E - SEQCRD 0 N ASN ASN 60 60 E E - SEQCRD 0 I ILE ILE 61 61 E E - SEQCRD 0 N ASN ASN 62 62 C T 5 SEQCRD 0 H HIS HIS 63 63 C T 5 SEQCRD 0 D ASP ASP 64 64 C T 5 SEQCRD 0 D ASP ASP 65 65 C T 5 SEQCRD 0 T THR THR 66 66 C T 5 SEQCRD 0 A ALA ALA 67 67 E B 5 SEQCRD 0 V VAL VAL 68 68 E E - SEQCRD 0 V VAL VAL 69 69 E E - SEQCRD 0 G GLY GLY 70 70 E E - SEQCRD 0 H HIS HIS 71 71 E E - SEQCRD 0 V VAL VAL 72 72 E E - SEQCRD 0 A ALA ALA 73 73 E E - SEQCRD 0 A ALA ALA 74 74 E E - SEQCRD 0 M MET MET 75 75 E E - SEQCRD 0 Q GLN GLN 76 76 E E - SEQCRD 0 S SER SER 77 77 E E - SEQCRD 0 V VAL VAL 78 78 E E - SEQCRD 0 R ARG ARG 79 79 C T 5 SEQCRD 0 D ASP ASP 80 80 C T 5 SEQCRD 0 G GLY GLY 81 81 E E - SEQCRD 0 L LEU LEU 82 82 E E - SEQCRD 0 F PHE PHE 83 83 E E - SEQCRD 0 C CYS CYS 84 84 E E - SEQCRD 0 L LEU LEU 85 85 E E - SEQCRD 0 G GLY GLY 86 86 E E - SEQCRD 0 C CYS CYS 87 87 E E - SEQCRD 0 V VAL VAL 88 88 E E - SEQCRD 0 T THR THR 89 89 C C - SEQCRD 0 S SER SER 90 90 C C - SEQCRD 0 P PRO PRO 91 91 H H - SEQCRD 0 R ARG ARG 92 92 H H - SEQCRD 0 F PHE PHE 93 93 H H - SEQCRD 0 L LEU LEU 94 94 H H - SEQCRD 0 E GLU GLU 95 95 H H - SEQCRD 0 I ILE ILE 96 96 H H - SEQCRD 0 V VAL VAL 97 97 H H - SEQCRD 0 R ARG ARG 98 98 H H - SEQCRD 0 R ARG ARG 99 99 H H - SEQCRD 0 A ALA ALA 100 100 H H - SEQCRD 0 S SER SER 101 101 H H - SEQCRD 0 E GLU GLU 102 102 C H 5 SEQCRD 0 K LYS LYS 103 103 C C - SEQCRD 0 S SER SER 104 104 C C - SEQCRD 0 E GLU GLU 105 105 H H - SEQCRD 0 L LEU LEU 106 106 H H - SEQCRD 0 V VAL VAL 107 107 H H - SEQCRD 0 S SER SER 108 108 H H - SEQCRD 0 R ARG ARG 109 109 H H - SEQCRD 0 G GLY GLY 110 110 H C 5 SEQCRD 0 P PRO PRO 111 111 C C - SEQCRD 0 V VAL VAL 112 112 C T 5 SEQCRD 0 S SER SER 113 113 C T 5 SEQCRD 0 P PRO PRO 114 114 C T 5 SEQCRD 0 L LEU LEU 115 115 C T 5 SEQCRD 0 Q GLN GLN 116 116 C C - SEQCRD 0 P PRO PRO 117 117 C C - SEQCRD 0 D ASP ASP 118 118 C C - SEQCRD 0 K LYS LYS 119 119 H H - SEQCRD 0 V VAL VAL 120 120 H H - SEQCRD 0 V VAL VAL 121 121 H H - SEQCRD 0 E GLU GLU 122 122 H H - SEQCRD 0 F PHE PHE 123 123 H H - SEQCRD 0 L LEU LEU 124 124 H H - SEQCRD 0 S SER SER 125 125 H H - SEQCRD 0 G GLY GLY 126 126 H H - SEQCRD 0 S SER SER 127 127 H H - SEQCRD 0 Y TYR TYR 128 128 C C - SEQCRD 0 A ALA ALA 129 129 C C - SEQCRD 0 G GLY GLY 130 130 E E - SEQCRD 0 L LEU LEU 131 131 E E - SEQCRD 0 S SER SER 132 132 E E - SEQCRD 0 L LEU LEU 133 133 E E - SEQCRD 0 S SER SER 134 134 E E - SEQCRD 0 S SER SER 135 135 E C 5 SEQCRD 0 R ARG ARG 136 136 C C - SEQCRD 0 R ARG ARG 137 137 C T 5 SEQCRD 0 C CYS CYS 138 138 C T 5 SEQCRD 0 D ASP ASP 139 139 C T 5 SEQCRD 0 D ASP ASP 140 140 C T 5 SEQCRD 0 V VAL VAL 141 141 C C - SEQCRD 0 E GLU GLU 142 142 C C - SEQCRD 0 V VAL --- 143 - - - 367 SEQCRD 0 A ALA --- 144 - - - 367 SEQCRD 0 T THR --- 145 - - - 367 SEQCRD 0 S SER --- 146 - - - 367 SEQCRD 0 L LEU --- 147 - - - 367 SEQCRD 0 S SER --- 148 - - - 367 SEQCRD 0 G GLY --- 149 - - - 367 SEQCRD 0 S SER --- 150 - - - 367 SEQCRD 0 E GLU --- 151 - - - 367 SEQCRD 0 T THR --- 152 - - - 367 SEQCRD 0 T THR --- 153 - - - 367 SEQCRD 0 P PRO PRO 154 154 C C - SEQCRD 0 F PHE PHE 155 155 C C - SEQCRD 0 K LYS LYS 156 156 E C 5 SEQCRD 0 H HIS HIS 157 157 E E - SEQCRD 0 V VAL VAL 158 158 E E - SEQCRD 0 A ALA ALA 159 159 E E - SEQCRD 0 L LEU LEU 160 160 E E - SEQCRD 0 C CYS CYS 161 161 E E - SEQCRD 0 S SER SER 162 162 E T 5 SEQCRD 0 V VAL VAL 163 163 C T 5 SEQCRD 0 G GLY GLY 164 164 C T 5 SEQCRD 0 R ARG ARG 165 165 C T 5 SEQCRD 0 R ARG ARG 166 166 C T 5 SEQCRD 0 R ARG ARG 167 167 C T 5 SEQCRD 0 G GLY GLY 168 168 C T 5 SEQCRD 0 T THR THR 169 169 E T 5 SEQCRD 0 L LEU LEU 170 170 E B 5 SEQCRD 0 A ALA ALA 171 171 E C 5 SEQCRD 0 V VAL VAL 172 172 E E - SEQCRD 0 Y TYR TYR 173 173 E E - SEQCRD 0 G GLY GLY 174 174 E E - SEQCRD 0 R ARG ARG 175 175 E C 5 SEQCRD 0 D ASP ASP 176 176 C C - SEQCRD 0 P PRO PRO 177 177 H H - SEQCRD 0 E GLU GLU 178 178 H H - SEQCRD 0 W TRP TRP 179 179 H H - SEQCRD 0 V VAL VAL 180 180 H H - SEQCRD 0 T THR THR 181 181 H H - SEQCRD 0 Q GLN GLN 182 182 H H - SEQCRD 0 R ARG ARG 183 183 H C 5 SEQCRD 0 F PHE PHE 184 184 C T 5 SEQCRD 0 P PRO PRO 185 185 C T 5 SEQCRD 0 D ASP ASP 186 186 C T 5 SEQCRD 0 L LEU LEU 187 187 C T 5 SEQCRD 0 T THR THR 188 188 C C - SEQCRD 0 A ALA ALA 189 189 H H - SEQCRD 0 A ALA ALA 190 190 H H - SEQCRD 0 D ASP ASP 191 191 H H - SEQCRD 0 R ARG ARG 192 192 H H - SEQCRD 0 D ASP ASP 193 193 H H - SEQCRD 0 G GLY GLY 194 194 H H - SEQCRD 0 L LEU LEU 195 195 H H - SEQCRD 0 R ARG ARG 196 196 H H - SEQCRD 0 A ALA ALA 197 197 H H - SEQCRD 0 Q GLN GLN 198 198 H H - SEQCRD 0 W TRP TRP 199 199 H H - SEQCRD 0 Q GLN GLN 200 200 C H 5 SEQCRD 0 R ARG ARG 201 201 C C - SEQCRD 0 C CYS CYS 202 202 C C - SEQCRD 0 G GLY GLY 203 203 C C - SEQCRD 0 S SER SER 204 204 C C - SEQCRD 0 T THR --- 205 - - - 367 SEQCRD 0 A ALA --- 206 - - - 367 SEQCRD 0 V VAL --- 207 - - - 367 SEQCRD 0 D ASP --- 208 - - - 367 SEQCRD 0 A ALA ALA 209 209 C C - SEQCRD 0 S SER SER 210 210 C C - SEQCRD 0 G GLY GLY 211 211 C C - SEQCRD 0 D ASP ASP 212 212 C C - SEQCRD 0 P PRO PRO 213 213 C C - SEQCRD 0 F PHE PHE 214 214 C B 5 SEQCRD 0 R ARG ARG 215 215 C C - SEQCRD 0 S SER SER 216 216 C C - SEQCRD 0 D ASP ASP 217 217 C C - SEQCRD 0 S SER SER 218 218 H H - SEQCRD 0 Y TYR TYR 219 219 H H - SEQCRD 0 G GLY GLY 220 220 H H - SEQCRD 0 L LEU LEU 221 221 H H - SEQCRD 0 L LEU LEU 222 222 H H - SEQCRD 0 G GLY GLY 223 223 H H - SEQCRD 0 N ASN ASN 224 224 H H - SEQCRD 0 S SER SER 225 225 H H - SEQCRD 0 V VAL VAL 226 226 H H - SEQCRD 0 D ASP ASP 227 227 H H - SEQCRD 0 A ALA ALA 228 228 H H - SEQCRD 0 L LEU LEU 229 229 C H 5 SEQCRD 0 Y TYR TYR 230 230 C C - SEQCRD 0 I ILE ILE 231 231 C T 5 SEQCRD 0 R ARG ARG 232 232 C T 5 SEQCRD 0 E GLU GLU 233 233 C T 5 SEQCRD 0 R ARG ARG 234 234 H H - SEQCRD 0 L LEU LEU 235 235 H H - SEQCRD 0 P PRO PRO 236 236 H H - SEQCRD 0 K LYS LYS 237 237 H H - SEQCRD 0 L LEU LEU 238 238 H H - SEQCRD 0 R ARG ARG 239 239 H H - SEQCRD 0 Y TYR TYR 240 240 H H - SEQCRD 0 D ASP ASP 241 241 H H - SEQCRD 0 K LYS LYS 242 242 H H - SEQCRD 0 Q GLN GLN 243 243 H H - SEQCRD 0 L LEU LEU 244 244 H H - SEQCRD 0 V VAL VAL 245 245 H H - SEQCRD 0 G GLY GLY 246 246 C C - SEQCRD 0 V VAL VAL 247 247 C C - SEQCRD 0 T THR THR 248 248 C T 5 SEQCRD 0 E GLU GLU 249 249 C T 5 SEQCRD 0 R ARG ARG 250 250 C T 5 SEQCRD 0 E GLU GLU 251 251 C T 5 SEQCRD 0 S SER SER 252 252 C T 5 SEQCRD 0 Y TYR TYR 253 253 C C - SEQCRD 0 V VAL VAL 254 254 C C - SEQCRD 0 K LYS LYS 255 255 C C - SEQCRD 0 A ALA ALA 256 256 C C - COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 54 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 54 PDB and STRIDE secondary structures differ S2CERR 6 54 PDB secondary structure is absent S2CERR 7 54 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.5 PARAME R-factor 0.185 PARAME B-factor 4.0 COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: VP40_HCMVA (P16753) COMMNT DATABA mutation: DATABA VAL A 143 --> ALA 143 CONFLICT