HEADSC 1luz COMMNT S2C correlation file created: Sat Dec 27 21:26:00 EST 2003 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A M MET --- 1 - - - 367 SEQCRD A L LEU --- 2 - - - 367 SEQCRD A A ALA --- 3 - - - 367 SEQCRD A F PHE PHE 4 4 C C - SEQCRD A C CYS CYS 5 5 C C - SEQCRD A Y TYR TYR 6 6 C C - SEQCRD A S SER SER 7 7 C C - SEQCRD A L LEU LEU 8 8 C C - SEQCRD A P PRO PRO 9 9 C C - SEQCRD A N ASN ASN 10 10 C T 5 SEQCRD A A ALA ALA 11 11 C T 5 SEQCRD A G GLY GLY 12 12 C T 5 SEQCRD A D ASP ASP 13 13 C E 5 SEQCRD A V VAL VAL 14 14 E E - SEQCRD A I ILE ILE 15 15 E E - SEQCRD A K LYS LYS 16 16 E E - SEQCRD A G GLY GLY 17 17 E E - SEQCRD A R ARG ARG 18 18 E E - SEQCRD A V VAL VAL 19 19 E E - SEQCRD A Y TYR TYR 20 20 E E - SEQCRD A E GLU GLU 21 21 E E - SEQCRD A K LYS LYS 22 22 E E - SEQCRD A D ASP ASP 23 23 C T 5 SEQCRD A Y TYR TYR 24 24 C T 5 SEQCRD A A ALA ALA 25 25 E E - SEQCRD A L LEU LEU 26 26 E E - SEQCRD A Y TYR TYR 27 27 E E - SEQCRD A I ILE ILE 28 28 E E - SEQCRD A Y TYR TYR 29 29 E E - SEQCRD A L LEU LEU 30 30 E E - SEQCRD A F PHE PHE 31 31 C T 5 SEQCRD A D ASP ASP 32 32 C T 5 SEQCRD A Y TYR TYR 33 33 C T 5 SEQCRD A P PRO PRO 34 34 C T 5 SEQCRD A H HIS HIS 35 35 C T 5 SEQCRD A F PHE PHE 36 36 C T 5 SEQCRD A E GLU GLU 37 37 E E - SEQCRD A A ALA ALA 38 38 E E - SEQCRD A I ILE ILE 39 39 E E - SEQCRD A L LEU LEU 40 40 E E - SEQCRD A A ALA ALA 41 41 C G 5 SEQCRD A E GLU GLU 42 42 H G 5 SEQCRD A S SER SER 43 43 H G 5 SEQCRD A V VAL VAL 44 44 H T 5 SEQCRD A K LYS LYS 45 45 C T 5 SEQCRD A M MSE MSE 46 46 C T 5 SEQCRD A H HIS HIS 47 47 H C 5 SEQCRD A M MSE MSE 48 48 H H - SEQCRD A D ASP ASP 49 49 H H - SEQCRD A R ARG ARG 50 50 H H - SEQCRD A Y TYR TYR 51 51 H H - SEQCRD A V VAL VAL 52 52 H H - SEQCRD A E GLU GLU 53 53 H H - SEQCRD A Y TYR TYR 54 54 H H - SEQCRD A R ARG ARG 55 55 H H - SEQCRD A D ASP ASP 56 56 H H - SEQCRD A K LYS LYS 57 57 H H - SEQCRD A L LEU LEU 58 58 H H - SEQCRD A V VAL VAL 59 59 H T 5 SEQCRD A G GLY GLY 60 60 C T 5 SEQCRD A K LYS LYS 61 61 C E 5 SEQCRD A T THR THR 62 62 E E - SEQCRD A V VAL VAL 63 63 E E - SEQCRD A K LYS LYS 64 64 E E - SEQCRD A V VAL VAL 65 65 E E - SEQCRD A K LYS LYS 66 66 E E - SEQCRD A V VAL VAL 67 67 E E - SEQCRD A I ILE ILE 68 68 E E - SEQCRD A R ARG ARG 69 69 E E - SEQCRD A V VAL VAL 70 70 E E - SEQCRD A D ASP ASP 71 71 E E - SEQCRD A Y TYR TYR 72 72 C T 5 SEQCRD A T THR THR 73 73 C T 5 SEQCRD A K LYS LYS 74 74 C T 5 SEQCRD A G GLY GLY 75 75 C T 5 SEQCRD A Y TYR TYR 76 76 E E - SEQCRD A I ILE ILE 77 77 E E - SEQCRD A D ASP ASP 78 78 E E - SEQCRD A V VAL VAL 79 79 E E - SEQCRD A N ASN ASN 80 80 E E - SEQCRD A Y TYR TYR 81 81 E E - SEQCRD A K LYS LYS 82 82 E E - SEQCRD A R ARG ARG 83 83 E E - SEQCRD A M MSE MSE 84 84 E E - SEQCRD A C CYS CYS 85 85 C C - SEQCRD A R ARG ARG 86 86 C C - SEQCRD A H HIS HIS 87 87 C C - SEQCRD A Q GLN GLN 88 88 C C - SEQCRD B M MET --- 1 - - - 367 SEQCRD B L LEU --- 2 - - - 367 SEQCRD B A ALA --- 3 - - - 367 SEQCRD B F PHE --- 4 - - - 367 SEQCRD B C CYS --- 5 - - - 367 SEQCRD B Y TYR TYR 6 6 C C - SEQCRD B S SER SER 7 7 C C - SEQCRD B L LEU LEU 8 8 C C - SEQCRD B P PRO PRO 9 9 C C - SEQCRD B N ASN ASN 10 10 C T 5 SEQCRD B A ALA ALA 11 11 C T 5 SEQCRD B G GLY GLY 12 12 C T 5 SEQCRD B D ASP ASP 13 13 C E 5 SEQCRD B V VAL VAL 14 14 E E - SEQCRD B I ILE ILE 15 15 E E - SEQCRD B K LYS LYS 16 16 E E - SEQCRD B G GLY GLY 17 17 E E - SEQCRD B R ARG ARG 18 18 E E - SEQCRD B V VAL VAL 19 19 E E - SEQCRD B Y TYR TYR 20 20 E E - SEQCRD B E GLU GLU 21 21 E E - SEQCRD B K LYS LYS 22 22 E E - SEQCRD B D ASP ASP 23 23 C T 5 SEQCRD B Y TYR TYR 24 24 C T 5 SEQCRD B A ALA ALA 25 25 E E - SEQCRD B L LEU LEU 26 26 E E - SEQCRD B Y TYR TYR 27 27 E E - SEQCRD B I ILE ILE 28 28 E E - SEQCRD B Y TYR TYR 29 29 E E - SEQCRD B L LEU LEU 30 30 E E - SEQCRD B F PHE PHE 31 31 C T 5 SEQCRD B D ASP ASP 32 32 C T 5 SEQCRD B Y TYR TYR 33 33 C T 5 SEQCRD B P PRO PRO 34 34 C T 5 SEQCRD B H HIS HIS 35 35 C T 5 SEQCRD B F PHE PHE 36 36 C T 5 SEQCRD B E GLU GLU 37 37 E E - SEQCRD B A ALA ALA 38 38 E E - SEQCRD B I ILE ILE 39 39 E E - SEQCRD B L LEU LEU 40 40 E E - SEQCRD B A ALA ALA 41 41 C G 5 SEQCRD B E GLU GLU 42 42 H G 5 SEQCRD B S SER SER 43 43 H G 5 SEQCRD B V VAL VAL 44 44 H T 5 SEQCRD B K LYS LYS 45 45 C T 5 SEQCRD B M MSE MSE 46 46 C T 5 SEQCRD B H HIS HIS 47 47 H C 5 SEQCRD B M MSE MSE 48 48 H H - SEQCRD B D ASP ASP 49 49 H H - SEQCRD B R ARG ARG 50 50 H H - SEQCRD B Y TYR TYR 51 51 H H - SEQCRD B V VAL VAL 52 52 H H - SEQCRD B E GLU GLU 53 53 H H - SEQCRD B Y TYR TYR 54 54 H H - SEQCRD B R ARG ARG 55 55 H H - SEQCRD B D ASP ASP 56 56 H H - SEQCRD B K LYS LYS 57 57 H H - SEQCRD B L LEU LEU 58 58 H H - SEQCRD B V VAL VAL 59 59 H T 5 SEQCRD B G GLY GLY 60 60 C T 5 SEQCRD B K LYS LYS 61 61 C E 5 SEQCRD B T THR THR 62 62 E E - SEQCRD B V VAL VAL 63 63 E E - SEQCRD B K LYS LYS 64 64 E E - SEQCRD B V VAL VAL 65 65 E E - SEQCRD B K LYS LYS 66 66 E E - SEQCRD B V VAL VAL 67 67 E E - SEQCRD B I ILE ILE 68 68 E E - SEQCRD B R ARG ARG 69 69 E E - SEQCRD B V VAL VAL 70 70 E E - SEQCRD B D ASP ASP 71 71 E E - SEQCRD B Y TYR TYR 72 72 C T 5 SEQCRD B T THR THR 73 73 C T 5 SEQCRD B K LYS LYS 74 74 C T 5 SEQCRD B G GLY GLY 75 75 C T 5 SEQCRD B Y TYR TYR 76 76 E E - SEQCRD B I ILE ILE 77 77 E E - SEQCRD B D ASP ASP 78 78 E E - SEQCRD B V VAL VAL 79 79 E E - SEQCRD B N ASN ASN 80 80 E E - SEQCRD B Y TYR TYR 81 81 E E - SEQCRD B K LYS LYS 82 82 E E - SEQCRD B R ARG ARG 83 83 E E - SEQCRD B M MSE MSE 84 84 E E - SEQCRD B C CYS CYS 85 85 C C - SEQCRD B R ARG ARG 86 86 C C - SEQCRD B H HIS HIS 87 87 C C - SEQCRD B Q GLN GLN 88 88 C C - COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 8 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 52 PDB and STRIDE secondary structures differ S2CERR 6 8 PDB secondary structure is absent S2CERR 7 8 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.8 PARAME R-factor ? PARAME B-factor ? COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: VK03_VACCV (P18378) COMMNT DATABA mutation: DATABA MSE B 84 --> MET 84 'MODIFIED RESIDUE' DATABA MSE A 84 --> MET 84 'MODIFIED RESIDUE' DATABA MSE B 46 --> MET 46 'MODIFIED RESIDUE' DATABA MSE B 48 --> MET 48 'MODIFIED RESIDUE' DATABA MSE A 46 --> MET 46 'MODIFIED RESIDUE' DATABA MSE A 48 --> MET 48 'MODIFIED RESIDUE'