HEADSC 1vfb COMMNT S2C correlation file created: Sat Oct 30 11:36:53 EDT 2004 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A D ASP ASP 1 1 C C - SEQCRD A I ILE ILE 2 2 C C - SEQCRD A V VAL VAL 3 3 C C - SEQCRD A L LEU LEU 4 4 E E - SEQCRD A T THR THR 5 5 E E - SEQCRD A Q GLN GLN 6 6 E E - SEQCRD A S SER SER 7 7 E E - SEQCRD A P PRO PRO 8 8 C T 5 SEQCRD A A ALA ALA 9 9 C T 5 SEQCRD A S SER SER 10 10 E E - SEQCRD A L LEU LEU 11 11 E E - SEQCRD A S SER SER 12 12 E E - SEQCRD A A ALA ALA 13 13 E E - SEQCRD A S SER SER 14 14 C T 5 SEQCRD A V VAL VAL 15 15 C T 5 SEQCRD A G GLY GLY 16 16 C T 5 SEQCRD A E GLU GLU 17 17 C b 5 SEQCRD A T THR THR 18 18 C C - SEQCRD A V VAL VAL 19 19 E E - SEQCRD A T THR THR 20 20 E E - SEQCRD A I ILE ILE 21 21 E E - SEQCRD A T THR THR 22 22 E E - SEQCRD A C CYS CYS 23 23 E E - SEQCRD A R ARG ARG 24 24 E E - SEQCRD A A ALA ALA 25 25 E E - SEQCRD A S SER SER 26 26 C T 5 SEQCRD A G GLY GLY 27 27 C T 5 SEQCRD A N ASN ASN 28 28 C T 5 SEQCRD A I ILE ILE 29 29 C T 5 SEQCRD A H HIS HIS 30 30 C T 5 SEQCRD A N ASN ASN 31 31 C T 5 SEQCRD A Y TYR TYR 32 32 C T 5 SEQCRD A L LEU LEU 33 33 E E - SEQCRD A A ALA ALA 34 34 E E - SEQCRD A W TRP TRP 35 35 E E - SEQCRD A Y TYR TYR 36 36 E E - SEQCRD A Q GLN GLN 37 37 E E - SEQCRD A Q GLN GLN 38 38 E E - SEQCRD A K LYS LYS 39 39 C T 5 SEQCRD A Q GLN GLN 40 40 C T 5 SEQCRD A G GLY GLY 41 41 C T 5 SEQCRD A K LYS LYS 42 42 C T 5 SEQCRD A S SER SER 43 43 C C - SEQCRD A P PRO PRO 44 44 C E 5 SEQCRD A Q GLN GLN 45 45 E E - SEQCRD A L LEU LEU 46 46 E E - SEQCRD A L LEU LEU 47 47 E E - SEQCRD A V VAL VAL 48 48 E E - SEQCRD A Y TYR TYR 49 49 E E - SEQCRD A Y TYR TYR 50 50 C T 5 SEQCRD A T THR THR 51 51 C T 5 SEQCRD A T THR THR 52 52 C T 5 SEQCRD A T THR THR 53 53 E E - SEQCRD A L LEU LEU 54 54 E E - SEQCRD A A ALA ALA 55 55 C T 5 SEQCRD A D ASP ASP 56 56 C T 5 SEQCRD A G GLY GLY 57 57 C T 5 SEQCRD A V VAL VAL 58 58 C T 5 SEQCRD A P PRO PRO 59 59 C T 5 SEQCRD A S SER SER 60 60 C T 5 SEQCRD A R ARG ARG 61 61 C T 5 SEQCRD A F PHE PHE 62 62 E E - SEQCRD A S SER SER 63 63 E E - SEQCRD A G GLY GLY 64 64 E E - SEQCRD A S SER SER 65 65 E E - SEQCRD A G GLY GLY 66 66 E E - SEQCRD A S SER SER 67 67 E E - SEQCRD A G GLY GLY 68 68 C T 5 SEQCRD A T THR THR 69 69 C T 5 SEQCRD A Q GLN GLN 70 70 E E - SEQCRD A Y TYR TYR 71 71 E E - SEQCRD A S SER SER 72 72 E E - SEQCRD A L LEU LEU 73 73 E E - SEQCRD A K LYS LYS 74 74 E E - SEQCRD A I ILE ILE 75 75 E E - SEQCRD A N ASN ASN 76 76 C T 5 SEQCRD A S SER SER 77 77 C T 5 SEQCRD A L LEU LEU 78 78 C b 5 SEQCRD A Q GLN GLN 79 79 H T 5 SEQCRD A P PRO PRO 80 80 H T 5 SEQCRD A E GLU GLU 81 81 H T 5 SEQCRD A D ASP ASP 82 82 H T 5 SEQCRD A F PHE PHE 83 83 H T 5 SEQCRD A G GLY GLY 84 84 E E - SEQCRD A S SER SER 85 85 E E - SEQCRD A Y TYR TYR 86 86 E E - SEQCRD A Y TYR TYR 87 87 E E - SEQCRD A C CYS CYS 88 88 E E - SEQCRD A Q GLN GLN 89 89 E E - SEQCRD A H HIS HIS 90 90 E E - SEQCRD A F PHE PHE 91 91 C C - SEQCRD A W TRP TRP 92 92 C C - SEQCRD A S SER SER 93 93 C C - SEQCRD A T THR THR 94 94 C C - SEQCRD A P PRO PRO 95 95 C C - SEQCRD A R ARG ARG 96 96 C C - SEQCRD A T THR THR 97 97 C E 5 SEQCRD A F PHE PHE 98 98 C E 5 SEQCRD A G GLY GLY 99 99 C C - SEQCRD A G GLY GLY 100 100 C C - SEQCRD A G GLY GLY 101 101 C C - SEQCRD A T THR THR 102 102 E E - SEQCRD A K LYS LYS 103 103 E E - SEQCRD A L LEU LEU 104 104 E E - SEQCRD A E GLU GLU 105 105 E E - SEQCRD A I ILE ILE 106 106 E E - SEQCRD A K LYS LYS 107 107 C C - SEQCRD B Q GLN GLN 1 1 C C - SEQCRD B V VAL VAL 2 2 C C - SEQCRD B Q GLN GLN 3 3 E E - SEQCRD B L LEU LEU 4 4 E E - SEQCRD B Q GLN GLN 5 5 E E - SEQCRD B E GLU GLU 6 6 E E - SEQCRD B S SER SER 7 7 E E - SEQCRD B G GLY GLY 8 8 C C - SEQCRD B P PRO PRO 9 9 C T 5 SEQCRD B G GLY GLY 10 10 C T 5 SEQCRD B L LEU LEU 11 11 E E - SEQCRD B V VAL VAL 12 12 E E - SEQCRD B A ALA ALA 13 13 C T 5 SEQCRD B P PRO PRO 14 14 C T 5 SEQCRD B S SER SER 15 15 C T 5 SEQCRD B Q GLN GLN 16 16 C T 5 SEQCRD B S SER SER 17 17 C C - SEQCRD B L LEU LEU 18 18 E E - SEQCRD B S SER SER 19 19 E E - SEQCRD B I ILE ILE 20 20 E E - SEQCRD B T THR THR 21 21 E E - SEQCRD B C CYS CYS 22 22 E E - SEQCRD B T THR THR 23 23 E E - SEQCRD B V VAL VAL 24 24 E E - SEQCRD B S SER SER 25 25 E E - SEQCRD B G GLY GLY 26 26 C C - SEQCRD B F PHE PHE 27 27 C C - SEQCRD B S SER SER 28 28 C T 5 SEQCRD B L LEU LEU 29 29 C T 5 SEQCRD B T THR THR 30 30 C T 5 SEQCRD B G GLY GLY 31 31 C T 5 SEQCRD B Y TYR TYR 32 32 C T 5 SEQCRD B G GLY GLY 33 33 E E - SEQCRD B V VAL VAL 34 34 E E - SEQCRD B N ASN ASN 35 35 E E - SEQCRD B W TRP TRP 36 36 E E - SEQCRD B V VAL VAL 37 37 E E - SEQCRD B R ARG ARG 38 38 E E - SEQCRD B Q GLN GLN 39 39 E E - SEQCRD B P PRO PRO 40 40 C T 5 SEQCRD B P PRO PRO 41 41 C T 5 SEQCRD B G GLY GLY 42 42 C T 5 SEQCRD B K LYS LYS 43 43 C T 5 SEQCRD B G GLY GLY 44 44 C C - SEQCRD B L LEU LEU 45 45 C C - SEQCRD B E GLU GLU 46 46 E E - SEQCRD B W TRP TRP 47 47 E E - SEQCRD B L LEU LEU 48 48 E E - SEQCRD B G GLY GLY 49 49 E E - SEQCRD B M MET MET 50 50 E E - SEQCRD B I ILE ILE 51 51 E E - SEQCRD B W TRP TRP 52 52 C T 5 SEQCRD B G GLY GLY 53 53 C T 5 SEQCRD B D ASP ASP 54 54 C T 5 SEQCRD B G GLY GLY 55 55 C T 5 SEQCRD B N ASN ASN 56 56 C C - SEQCRD B T THR THR 57 57 E E - SEQCRD B D ASP ASP 58 58 E E - SEQCRD B Y TYR TYR 59 59 E E - SEQCRD B N ASN ASN 60 60 C T 5 SEQCRD B S SER SER 61 61 C T 5 SEQCRD B A ALA ALA 62 62 C T 5 SEQCRD B L LEU LEU 63 63 H T 5 SEQCRD B K LYS LYS 64 64 H G 5 SEQCRD B S SER SER 65 65 H G 5 SEQCRD B R ARG ARG 66 66 C G 5 SEQCRD B L LEU LEU 67 67 E E - SEQCRD B S SER SER 68 68 E E - SEQCRD B I ILE ILE 69 69 E E - SEQCRD B S SER SER 70 70 E E - SEQCRD B K LYS LYS 71 71 E E - SEQCRD B D ASP ASP 72 72 E E - SEQCRD B N ASN ASN 73 73 C G 5 SEQCRD B S SER SER 74 74 C G 5 SEQCRD B K LYS LYS 75 75 C G 5 SEQCRD B S SER SER 76 76 C C - SEQCRD B Q GLN GLN 77 77 E E - SEQCRD B V VAL VAL 78 78 E E - SEQCRD B F PHE PHE 79 79 E E - SEQCRD B L LEU LEU 80 80 E E - SEQCRD B K LYS LYS 81 81 E E - SEQCRD B M MET MET 82 82 E E - SEQCRD B N ASN ASN 83 83 C C - SEQCRD B S SER SER 84 84 C C - SEQCRD B L LEU LEU 85 85 C C - SEQCRD B H HIS HIS 86 86 H C 5 SEQCRD B T THR THR 87 87 H G 5 SEQCRD B D ASP ASP 88 88 H G 5 SEQCRD B D ASP ASP 89 89 H G 5 SEQCRD B T THR THR 90 90 H C 5 SEQCRD B A ALA ALA 91 91 E E - SEQCRD B R ARG ARG 92 92 E E - SEQCRD B Y TYR TYR 93 93 E E - SEQCRD B Y TYR TYR 94 94 E E - SEQCRD B C CYS CYS 95 95 E E - SEQCRD B A ALA ALA 96 96 E E - SEQCRD B R ARG ARG 97 97 E E - SEQCRD B E GLU GLU 98 98 E E - SEQCRD B R ARG ARG 99 99 C E 5 SEQCRD B D ASP ASP 100 100 C T 5 SEQCRD B Y TYR TYR 101 101 C T 5 SEQCRD B R ARG ARG 102 102 C E 5 SEQCRD B L LEU LEU 103 103 E E - SEQCRD B D ASP ASP 104 104 E E - SEQCRD B Y TYR TYR 105 105 E E - SEQCRD B W TRP TRP 106 106 E E - SEQCRD B G GLY GLY 107 107 C C - SEQCRD B Q GLN GLN 108 108 C C - SEQCRD B G GLY GLY 109 109 C C - SEQCRD B T THR THR 110 110 E E - SEQCRD B T THR THR 111 111 E E - SEQCRD B L LEU LEU 112 112 E E - SEQCRD B T THR THR 113 113 E E - SEQCRD B V VAL VAL 114 114 E E - SEQCRD B S SER SER 115 115 C C - SEQCRD B S SER SER 116 116 C C - SEQCRD C K LYS LYS 1 1 C C - SEQCRD C V VAL VAL 2 2 C B 5 SEQCRD C F PHE PHE 3 3 C C - SEQCRD C G GLY GLY 4 4 H C 5 SEQCRD C R ARG ARG 5 5 H H - SEQCRD C C CYS CYS 6 6 H H - SEQCRD C E GLU GLU 7 7 H H - SEQCRD C L LEU LEU 8 8 H H - SEQCRD C A ALA ALA 9 9 H H - SEQCRD C A ALA ALA 10 10 H H - SEQCRD C A ALA ALA 11 11 H H - SEQCRD C M MET MET 12 12 H H - SEQCRD C K LYS LYS 13 13 H H - SEQCRD C R ARG ARG 14 14 H H - SEQCRD C H HIS HIS 15 15 H H - SEQCRD C G GLY GLY 16 16 C C - SEQCRD C L LEU LEU 17 17 C T 5 SEQCRD C D ASP ASP 18 18 C T 5 SEQCRD C N ASN ASN 19 19 C T 5 SEQCRD C Y TYR TYR 20 20 C G 5 SEQCRD C R ARG ARG 21 21 C G 5 SEQCRD C G GLY GLY 22 22 C G 5 SEQCRD C Y TYR TYR 23 23 C C - SEQCRD C S SER SER 24 24 H C 5 SEQCRD C L LEU LEU 25 25 H H - SEQCRD C G GLY GLY 26 26 H H - SEQCRD C N ASN ASN 27 27 H H - SEQCRD C W TRP TRP 28 28 H H - SEQCRD C V VAL VAL 29 29 H H - SEQCRD C C CYS CYS 30 30 H H - SEQCRD C A ALA ALA 31 31 H H - SEQCRD C A ALA ALA 32 32 H H - SEQCRD C K LYS LYS 33 33 H H - SEQCRD C F PHE PHE 34 34 H H - SEQCRD C E GLU GLU 35 35 H H - SEQCRD C S SER SER 36 36 H H - SEQCRD C N ASN ASN 37 37 H T 5 SEQCRD C F PHE PHE 38 38 C T 5 SEQCRD C N ASN ASN 39 39 C B 5 SEQCRD C T THR THR 40 40 C T 5 SEQCRD C Q GLN GLN 41 41 C T 5 SEQCRD C A ALA ALA 42 42 C T 5 SEQCRD C T THR THR 43 43 E E - SEQCRD C N ASN ASN 44 44 E E - SEQCRD C R ARG ARG 45 45 E E - SEQCRD C N ASN ASN 46 46 C T 5 SEQCRD C T THR THR 47 47 C T 5 SEQCRD C D ASP ASP 48 48 C T 5 SEQCRD C G GLY GLY 49 49 C T 5 SEQCRD C S SER SER 50 50 C C - SEQCRD C T THR THR 51 51 E E - SEQCRD C D ASP ASP 52 52 E E - SEQCRD C Y TYR TYR 53 53 E E - SEQCRD C G GLY GLY 54 54 C T 5 SEQCRD C I ILE ILE 55 55 C T 5 SEQCRD C L LEU LEU 56 56 C T 5 SEQCRD C Q GLN GLN 57 57 C T 5 SEQCRD C I ILE ILE 58 58 E E - SEQCRD C N ASN ASN 59 59 E E - SEQCRD C S SER SER 60 60 C T 5 SEQCRD C R ARG ARG 61 61 C T 5 SEQCRD C W TRP TRP 62 62 C T 5 SEQCRD C W TRP TRP 63 63 C T 5 SEQCRD C C CYS CYS 64 64 C C - SEQCRD C N ASN ASN 65 65 C B 5 SEQCRD C D ASP ASP 66 66 C T 5 SEQCRD C G GLY GLY 67 67 C T 5 SEQCRD C R ARG ARG 68 68 C T 5 SEQCRD C T THR THR 69 69 C T 5 SEQCRD C P PRO PRO 70 70 C T 5 SEQCRD C G GLY GLY 71 71 C T 5 SEQCRD C S SER SER 72 72 C T 5 SEQCRD C R ARG ARG 73 73 C C - SEQCRD C N ASN ASN 74 74 C T 5 SEQCRD C L LEU LEU 75 75 C T 5 SEQCRD C C CYS CYS 76 76 C T 5 SEQCRD C N ASN ASN 77 77 C T 5 SEQCRD C I ILE ILE 78 78 C C - SEQCRD C P PRO PRO 79 79 C B 5 SEQCRD C C CYS CYS 80 80 H G 5 SEQCRD C S SER SER 81 81 H G 5 SEQCRD C A ALA ALA 82 82 H G 5 SEQCRD C L LEU LEU 83 83 H G 5 SEQCRD C L LEU LEU 84 84 H C 5 SEQCRD C S SER SER 85 85 H T 5 SEQCRD C S SER SER 86 86 C T 5 SEQCRD C D ASP ASP 87 87 C T 5 SEQCRD C I ILE ILE 88 88 H H - SEQCRD C T THR THR 89 89 H H - SEQCRD C A ALA ALA 90 90 H H - SEQCRD C S SER SER 91 91 H H - SEQCRD C V VAL VAL 92 92 H H - SEQCRD C N ASN ASN 93 93 H H - SEQCRD C C CYS CYS 94 94 H H - SEQCRD C A ALA ALA 95 95 H H - SEQCRD C K LYS LYS 96 96 H H - SEQCRD C K LYS LYS 97 97 H H - SEQCRD C I ILE ILE 98 98 H H - SEQCRD C V VAL VAL 99 99 H C 5 SEQCRD C S SER SER 100 100 C C - SEQCRD C D ASP ASP 101 101 C T 5 SEQCRD C G GLY GLY 102 102 C T 5 SEQCRD C N ASN ASN 103 103 H T 5 SEQCRD C G GLY GLY 104 104 H G 5 SEQCRD C M MET MET 105 105 H G 5 SEQCRD C N ASN ASN 106 106 H G 5 SEQCRD C A ALA ALA 107 107 H G 5 SEQCRD C W TRP TRP 108 108 H C 5 SEQCRD C V VAL VAL 109 109 H H - SEQCRD C A ALA ALA 110 110 H H - SEQCRD C W TRP TRP 111 111 H H - SEQCRD C R ARG ARG 112 112 H H - SEQCRD C N ASN ASN 113 113 H H - SEQCRD C R ARG ARG 114 114 H H - SEQCRD C C CYS CYS 115 115 H H - SEQCRD C K LYS LYS 116 116 C T 5 SEQCRD C G GLY GLY 117 117 C T 5 SEQCRD C T THR THR 118 118 C T 5 SEQCRD C D ASP ASP 119 119 H T 5 SEQCRD C V VAL VAL 120 120 H G 5 SEQCRD C Q GLN GLN 121 121 H G 5 SEQCRD C A ALA ALA 122 122 H G 5 SEQCRD C W TRP TRP 123 123 H G 5 SEQCRD C I ILE ILE 124 124 H T 5 SEQCRD C R ARG ARG 125 125 C T 5 SEQCRD C G GLY GLY 126 126 C T 5 SEQCRD C C CYS CYS 127 127 C T 5 SEQCRD C R ARG ARG 128 128 C C - SEQCRD C L LEU LEU 129 129 C C - COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 0 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 147 PDB and STRIDE secondary structures differ S2CERR 6 0 PDB secondary structure is absent S2CERR 7 0 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.8 PARAME R-factor 0.185 PARAME B-factor ? COMMNT COMMNT Reference database information: DATABA source: DATABA GB: AAB30177 (545862) DATABA GB: AAA69766 (896294) DATABA SWS: LYC_CHICK (P00698) COMMNT DATABA mutation: DATABA VAL A 3 --> GLU 3 CONFLICT DATABA ? A ? --> PRO 95 DELETION DATABA THR A 51 --> ALA 51 CONFLICT DATABA THR A 52 --> GLN 52 CONFLICT DATABA TYR A 50 --> LYS 50 CONFLICT DATABA ARG A 96 --> TRP 97 CONFLICT DATABA LEU B 112 --> VAL 244 CONFLICT