HEADSC 1vpp COMMNT S2C correlation file created: Sat Oct 30 11:39:52 EDT 2004 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD V G GLY --- 1 - - - 367 SEQCRD V Q GLN --- 2 - - - 367 SEQCRD V N ASN --- 3 - - - 367 SEQCRD V H HIS --- 4 - - - 367 SEQCRD V H HIS --- 5 - - - 367 SEQCRD V E GLU GLU 6 13 C C 4 SEQCRD V V VAL VAL 7 14 C C 4 SEQCRD V V VAL VAL 8 15 C B 45 SEQCRD V K LYS LYS 9 16 C C 4 SEQCRD V F PHE PHE 10 17 H H 4 SEQCRD V M MET MET 11 18 H H 4 SEQCRD V D ASP ASP 12 19 H H 4 SEQCRD V V VAL VAL 13 20 H H 4 SEQCRD V Y TYR TYR 14 21 H H 4 SEQCRD V Q GLN GLN 15 22 H H 4 SEQCRD V R ARG ARG 16 23 H H 4 SEQCRD V S SER SER 17 24 H H 4 SEQCRD V Y TYR TYR 18 25 C B 45 SEQCRD V C CYS CYS 19 26 C C 4 SEQCRD V H HIS HIS 20 27 E E 4 SEQCRD V P PRO PRO 21 28 E E 4 SEQCRD V I ILE ILE 22 29 E E 4 SEQCRD V E GLU GLU 23 30 E E 4 SEQCRD V T THR THR 24 31 E E 4 SEQCRD V L LEU LEU 25 32 E E 4 SEQCRD V V VAL VAL 26 33 E E 4 SEQCRD V D ASP ASP 27 34 E E 4 SEQCRD V I ILE ILE 28 35 H G 45 SEQCRD V F PHE PHE 29 36 H G 45 SEQCRD V Q GLN GLN 30 37 H G 45 SEQCRD V E GLU GLU 31 38 H T 45 SEQCRD V Y TYR TYR 32 39 C T 45 SEQCRD V P PRO PRO 33 40 C T 45 SEQCRD V D ASP ASP 34 41 C T 45 SEQCRD V E GLU GLU 35 42 C T 45 SEQCRD V I ILE ILE 36 43 C T 45 SEQCRD V E GLU GLU 37 44 C T 45 SEQCRD V Y TYR TYR 38 45 C T 45 SEQCRD V I ILE ILE 39 46 E E 4 SEQCRD V F PHE PHE 40 47 E E 4 SEQCRD V K LYS LYS 41 48 E E 4 SEQCRD V P PRO PRO 42 49 C T 45 SEQCRD V S SER SER 43 50 C T 45 SEQCRD V C CYS CYS 44 51 E E 4 SEQCRD V V VAL VAL 45 52 E E 4 SEQCRD V P PRO PRO 46 53 E E 4 SEQCRD V L LEU LEU 47 54 E E 4 SEQCRD V M MET MET 48 55 E E 4 SEQCRD V R ARG ARG 49 56 E E 4 SEQCRD V C CYS CYS 50 57 E E 4 SEQCRD V G GLY GLY 51 58 E E 4 SEQCRD V G GLY GLY 52 59 C C 4 SEQCRD V C CYS CYS 53 60 C B 45 SEQCRD V C CYS CYS 54 61 C C 4 SEQCRD V N ASN ASN 55 62 C C 4 SEQCRD V D ASP ASP 56 63 C T 45 SEQCRD V E GLU GLU 57 64 C T 45 SEQCRD V G GLY GLY 58 65 C T 45 SEQCRD V L LEU LEU 59 66 E E 4 SEQCRD V E GLU GLU 60 67 E E 4 SEQCRD V C CYS CYS 61 68 E E 4 SEQCRD V V VAL VAL 62 69 E E 4 SEQCRD V P PRO PRO 63 70 E E 4 SEQCRD V T THR THR 64 71 E E 4 SEQCRD V E GLU GLU 65 72 E E 4 SEQCRD V E GLU GLU 66 73 E E 4 SEQCRD V S SER SER 67 74 E E 4 SEQCRD V N ASN ASN 68 75 E E 4 SEQCRD V I ILE ILE 69 76 E E 4 SEQCRD V T THR THR 70 77 E E 4 SEQCRD V M MET MET 71 78 E E 4 SEQCRD V Q GLN GLN 72 79 E E 4 SEQCRD V I ILE ILE 73 80 E E 4 SEQCRD V M MET MET 74 81 E E 4 SEQCRD V R ARG ARG 75 82 E E 4 SEQCRD V I ILE ILE 76 83 E E 4 SEQCRD V K LYS LYS 77 84 C T 45 SEQCRD V P PRO PRO 78 85 C T 45 SEQCRD V H HIS HIS 79 86 C T 45 SEQCRD V Q GLN GLN 80 87 C T 45 SEQCRD V G GLY GLY 81 88 C T 45 SEQCRD V Q GLN GLN 82 89 E E 4 SEQCRD V H HIS HIS 83 90 E E 4 SEQCRD V I ILE ILE 84 91 E E 4 SEQCRD V G GLY GLY 85 92 E E 4 SEQCRD V E GLU GLU 86 93 E E 4 SEQCRD V M MET MET 87 94 E E 4 SEQCRD V S SER SER 88 95 E E 4 SEQCRD V F PHE PHE 89 96 E E 4 SEQCRD V L LEU LEU 90 97 E E 4 SEQCRD V Q GLN GLN 91 98 E E 4 SEQCRD V H HIS HIS 92 99 E E 4 SEQCRD V N ASN ASN 93 100 C E 45 SEQCRD V K LYS LYS 94 101 E E 4 SEQCRD V C CYS CYS 95 102 E E 4 SEQCRD V E GLU GLU 96 103 E E 4 SEQCRD V C CYS CYS 97 104 E E 4 SEQCRD V R ARG ARG 98 105 E E 4 SEQCRD V P PRO PRO 99 106 E E 4 SEQCRD V K LYS LYS 100 107 C C 4 SEQCRD V K LYS LYS 101 108 C C 4 SEQCRD V D ASP --- 102 - - - 367 SEQCRD W G GLY --- 1 - - - 367 SEQCRD W Q GLN --- 2 - - - 367 SEQCRD W N ASN --- 3 - - - 367 SEQCRD W H HIS --- 4 - - - 367 SEQCRD W H HIS --- 5 - - - 367 SEQCRD W E GLU GLU 6 13 C C 4 SEQCRD W V VAL VAL 7 14 C C 4 SEQCRD W V VAL VAL 8 15 C B 45 SEQCRD W K LYS LYS 9 16 C C 4 SEQCRD W F PHE PHE 10 17 H H 4 SEQCRD W M MET MET 11 18 H H 4 SEQCRD W D ASP ASP 12 19 H H 4 SEQCRD W V VAL VAL 13 20 H H 4 SEQCRD W Y TYR TYR 14 21 H H 4 SEQCRD W Q GLN GLN 15 22 H H 4 SEQCRD W R ARG ARG 16 23 H H 4 SEQCRD W S SER SER 17 24 H H 4 SEQCRD W Y TYR TYR 18 25 C B 45 SEQCRD W C CYS CYS 19 26 C C 4 SEQCRD W H HIS HIS 20 27 E E 4 SEQCRD W P PRO PRO 21 28 E E 4 SEQCRD W I ILE ILE 22 29 E E 4 SEQCRD W E GLU GLU 23 30 E E 4 SEQCRD W T THR THR 24 31 E E 4 SEQCRD W L LEU LEU 25 32 E E 4 SEQCRD W V VAL VAL 26 33 E E 4 SEQCRD W D ASP ASP 27 34 E E 4 SEQCRD W I ILE ILE 28 35 C C 4 SEQCRD W F PHE PHE 29 36 C C 4 SEQCRD W Q GLN --- 30 - - - 367 SEQCRD W E GLU --- 31 - - - 367 SEQCRD W Y TYR --- 32 - - - 367 SEQCRD W P PRO --- 33 - - - 367 SEQCRD W D ASP --- 34 - - - 367 SEQCRD W E GLU --- 35 - - - 367 SEQCRD W I ILE ILE 36 43 C C 4 SEQCRD W E GLU GLU 37 44 C C 4 SEQCRD W Y TYR TYR 38 45 C C 4 SEQCRD W I ILE ILE 39 46 E E 4 SEQCRD W F PHE PHE 40 47 E E 4 SEQCRD W K LYS LYS 41 48 E E 4 SEQCRD W P PRO PRO 42 49 C T 45 SEQCRD W S SER SER 43 50 C T 45 SEQCRD W C CYS CYS 44 51 E E 4 SEQCRD W V VAL VAL 45 52 E E 4 SEQCRD W P PRO PRO 46 53 E E 4 SEQCRD W L LEU LEU 47 54 E E 4 SEQCRD W M MET MET 48 55 E E 4 SEQCRD W R ARG ARG 49 56 E E 4 SEQCRD W C CYS CYS 50 57 E E 4 SEQCRD W G GLY GLY 51 58 E E 4 SEQCRD W G GLY GLY 52 59 C C 4 SEQCRD W C CYS CYS 53 60 C B 45 SEQCRD W C CYS CYS 54 61 C C 4 SEQCRD W N ASN ASN 55 62 C C 4 SEQCRD W D ASP ASP 56 63 C T 45 SEQCRD W E GLU GLU 57 64 C T 45 SEQCRD W G GLY GLY 58 65 C T 45 SEQCRD W L LEU LEU 59 66 E E 4 SEQCRD W E GLU GLU 60 67 E E 4 SEQCRD W C CYS CYS 61 68 E E 4 SEQCRD W V VAL VAL 62 69 E E 4 SEQCRD W P PRO PRO 63 70 E E 4 SEQCRD W T THR THR 64 71 E E 4 SEQCRD W E GLU GLU 65 72 E E 4 SEQCRD W E GLU GLU 66 73 E E 4 SEQCRD W S SER SER 67 74 E E 4 SEQCRD W N ASN ASN 68 75 E E 4 SEQCRD W I ILE ILE 69 76 E E 4 SEQCRD W T THR THR 70 77 E E 4 SEQCRD W M MET MET 71 78 E E 4 SEQCRD W Q GLN GLN 72 79 E E 4 SEQCRD W I ILE ILE 73 80 E E 4 SEQCRD W M MET MET 74 81 E E 4 SEQCRD W R ARG ARG 75 82 E E 4 SEQCRD W I ILE ILE 76 83 E E 4 SEQCRD W K LYS LYS 77 84 E E 4 SEQCRD W P PRO PRO 78 85 C T 45 SEQCRD W H HIS HIS 79 86 C T 45 SEQCRD W Q GLN GLN 80 87 C T 45 SEQCRD W G GLY GLY 81 88 E E 4 SEQCRD W Q GLN GLN 82 89 E E 4 SEQCRD W H HIS HIS 83 90 E E 4 SEQCRD W I ILE ILE 84 91 E E 4 SEQCRD W G GLY GLY 85 92 E E 4 SEQCRD W E GLU GLU 86 93 E E 4 SEQCRD W M MET MET 87 94 E E 4 SEQCRD W S SER SER 88 95 E E 4 SEQCRD W F PHE PHE 89 96 E E 4 SEQCRD W L LEU LEU 90 97 E E 4 SEQCRD W Q GLN GLN 91 98 E E 4 SEQCRD W H HIS HIS 92 99 E E 4 SEQCRD W N ASN ASN 93 100 C E 45 SEQCRD W K LYS LYS 94 101 E E 4 SEQCRD W C CYS CYS 95 102 E E 4 SEQCRD W E GLU GLU 96 103 E E 4 SEQCRD W C CYS CYS 97 104 E E 4 SEQCRD W R ARG ARG 98 105 E E 4 SEQCRD W P PRO PRO 99 106 E E 4 SEQCRD W K LYS LYS 100 107 C C 4 SEQCRD W K LYS LYS 101 108 C C 4 SEQCRD W D ASP --- 102 - - - 367 SEQCRD X R ARG ARG 1 1 C C - SEQCRD X G GLY GLY 2 2 C C - SEQCRD X W TRP TRP 3 3 C E 5 SEQCRD X V VAL VAL 4 4 C E 5 SEQCRD X E GLU GLU 5 5 C E 5 SEQCRD X I ILE ILE 6 6 C E 5 SEQCRD X C CYS CYS 7 7 C E 5 SEQCRD X A ALA ALA 8 8 C E 5 SEQCRD X A ALA ALA 9 9 C B 5 SEQCRD X D ASP ASP 10 10 C T 5 SEQCRD X D ASP ASP 11 11 C T 5 SEQCRD X Y TYR TYR 12 12 C T 5 SEQCRD X G GLY GLY 13 13 C T 5 SEQCRD X R ARG ARG 14 14 C C - SEQCRD X C CYS CYS 15 15 C B 5 SEQCRD X L LEU LEU 16 16 C C - SEQCRD X T THR THR 17 17 C C - SEQCRD X E GLU GLU 18 18 C C - SEQCRD X A ALA ALA 19 19 C C - SEQCRD X Q GLN GLN 20 20 C C - SEQCRD Y R ARG ARG 1 1 C C - SEQCRD Y G GLY GLY 2 2 C C - SEQCRD Y W TRP TRP 3 3 C C - SEQCRD Y V VAL VAL 4 4 C E 5 SEQCRD Y E GLU GLU 5 5 C E 5 SEQCRD Y I ILE ILE 6 6 C E 5 SEQCRD Y C CYS CYS 7 7 C E 5 SEQCRD Y A ALA ALA 8 8 C E 5 SEQCRD Y A ALA ALA 9 9 C B 5 SEQCRD Y D ASP ASP 10 10 C T 5 SEQCRD Y D ASP ASP 11 11 C T 5 SEQCRD Y Y TYR TYR 12 12 C T 5 SEQCRD Y G GLY GLY 13 13 C T 5 SEQCRD Y R ARG ARG 14 14 C C - SEQCRD Y C CYS CYS 15 15 C B 5 SEQCRD Y L LEU LEU 16 16 C C - SEQCRD Y T THR THR 17 17 C C - SEQCRD Y E GLU GLU 18 18 C C - SEQCRD Y A ALA --- 19 - - - 367 SEQCRD Y Q GLN --- 20 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 20 No ATOM record S2CERR 4 186 SEQRES and ATOM residue numbers differ S2CERR 5 60 PDB and STRIDE secondary structures differ S2CERR 6 20 PDB secondary structure is absent S2CERR 7 20 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.9 PARAME R-factor 0.19 PARAME B-factor 27.1 COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: VEGF_HUMAN (?) COMMNT DATABA mutation: