HEADSC 1ybk COMMNT S2C correlation file created: Thu Dec 29 10:58:03 EST 2005 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD B G GLY GLY 1 1 C C - SEQCRD B S SER SER 2 2 H C 5 SEQCRD B I ILE ILE 3 3 H H - SEQCRD B I ILE ILE 4 4 H H - SEQCRD B N ASN ASN 5 5 H H - SEQCRD B E GLU GLU 6 6 H H - SEQCRD B T THR THR 7 7 H H - SEQCRD B A ALA ALA 8 8 H H - SEQCRD B D ASP ASP 9 9 H H - SEQCRD B D ASP ASP 10 10 H H - SEQCRD B I ILE ILE 11 11 H H - SEQCRD B V VAL VAL 12 12 H H - SEQCRD B Y TYR TYR 13 13 H H - SEQCRD B R ARG ARG 14 14 H H - SEQCRD B L LEU LEU 15 15 H H - SEQCRD B T THR THR 16 16 H H - SEQCRD B V VAL VAL 17 17 H H - SEQCRD B I ILE ILE 18 18 H H - SEQCRD B I ILE ILE 19 19 H H - SEQCRD B D ASP ASP 20 20 H H - SEQCRD B D ASP ASP 21 21 H H - SEQCRD B R ARG ARG 22 22 H H - SEQCRD B Y TYR TYR 23 23 H H - SEQCRD B E GLU GLU 24 24 H H - SEQCRD B S SER SER 25 25 H H - SEQCRD B L LEU LEU 26 26 H H - SEQCRD B K LYS LYS 27 27 H H - SEQCRD B N ASN ASN 28 28 H H - SEQCRD B L LEU LEU 29 29 H H - SEQCRD B I ILE ILE 30 30 H H - SEQCRD B T THR THR 31 31 H H - SEQCRD B L LEU LEU 32 32 H H - SEQCRD B R ARG ARG 33 33 H H - SEQCRD B A ALA ALA 34 34 H H - SEQCRD B D ASP ASP 35 35 H H - SEQCRD B R ARG ARG 36 36 H H - SEQCRD B L LEU LEU 37 37 H H - SEQCRD B E GLU GLU 38 38 H H - SEQCRD B M MET MET 39 39 H H - SEQCRD B I ILE ILE 40 40 H H - SEQCRD B I ILE ILE 41 41 H H - SEQCRD B N ASN ASN 42 42 H H - SEQCRD B D ASP ASP 43 43 H H - SEQCRD B N ASN ASN 44 44 H H - SEQCRD B V VAL VAL 45 45 H H - SEQCRD B S SER SER 46 46 H H - SEQCRD B T THR THR 47 47 H H - SEQCRD B I ILE ILE 48 48 H H - SEQCRD B L LEU LEU 49 49 H H - SEQCRD B A ALA ALA 50 50 H H - SEQCRD B S SER SER 51 51 H H - SEQCRD B I ILE ILE 52 52 H C 5 SEQCRD D G GLY GLY 1 1 C C - SEQCRD D S SER SER 2 2 H H - SEQCRD D I ILE ILE 3 3 H H - SEQCRD D I ILE ILE 4 4 H H - SEQCRD D N ASN ASN 5 5 H H - SEQCRD D E GLU GLU 6 6 H H - SEQCRD D T THR THR 7 7 H H - SEQCRD D A ALA ALA 8 8 H H - SEQCRD D D ASP ASP 9 9 H H - SEQCRD D D ASP ASP 10 10 H H - SEQCRD D I ILE ILE 11 11 H H - SEQCRD D V VAL VAL 12 12 H H - SEQCRD D Y TYR TYR 13 13 H H - SEQCRD D R ARG ARG 14 14 H H - SEQCRD D L LEU LEU 15 15 H H - SEQCRD D T THR THR 16 16 H H - SEQCRD D V VAL VAL 17 17 H H - SEQCRD D I ILE ILE 18 18 H H - SEQCRD D I ILE ILE 19 19 H H - SEQCRD D D ASP ASP 20 20 H H - SEQCRD D D ASP ASP 21 21 H H - SEQCRD D R ARG ARG 22 22 H H - SEQCRD D Y TYR TYR 23 23 H H - SEQCRD D E GLU GLU 24 24 H H - SEQCRD D S SER SER 25 25 H H - SEQCRD D L LEU LEU 26 26 H H - SEQCRD D K LYS LYS 27 27 H H - SEQCRD D N ASN ASN 28 28 H H - SEQCRD D L LEU LEU 29 29 H H - SEQCRD D I ILE ILE 30 30 H H - SEQCRD D T THR THR 31 31 H H - SEQCRD D L LEU LEU 32 32 H H - SEQCRD D R ARG ARG 33 33 H H - SEQCRD D A ALA ALA 34 34 H H - SEQCRD D D ASP ASP 35 35 H H - SEQCRD D R ARG ARG 36 36 H H - SEQCRD D L LEU LEU 37 37 H H - SEQCRD D E GLU GLU 38 38 H H - SEQCRD D M MET MET 39 39 H H - SEQCRD D I ILE ILE 40 40 H H - SEQCRD D I ILE ILE 41 41 H H - SEQCRD D N ASN ASN 42 42 H H - SEQCRD D D ASP ASP 43 43 H H - SEQCRD D N ASN ASN 44 44 H H - SEQCRD D V VAL VAL 45 45 H H - SEQCRD D S SER SER 46 46 H H - SEQCRD D T THR THR 47 47 H H - SEQCRD D I ILE ILE 48 48 H H - SEQCRD D L LEU LEU 49 49 H H - SEQCRD D A ALA ALA 50 50 H H - SEQCRD D S SER SER 51 51 H H - SEQCRD D I ILE ILE 52 52 H C 5 SEQCRD C G GLY --- 1 - - - 367 SEQCRD C S SER --- 2 - - - 367 SEQCRD C I ILE --- 3 - - - 367 SEQCRD C I ILE ILE 4 4 H H - SEQCRD C N ASN ASN 5 5 H H - SEQCRD C E GLU GLU 6 6 H H - SEQCRD C T THR THR 7 7 H H - SEQCRD C A ALA ALA 8 8 H H - SEQCRD C D ASP ASP 9 9 H H - SEQCRD C D ASP ASP 10 10 H H - SEQCRD C I ILE ILE 11 11 H H - SEQCRD C V VAL VAL 12 12 H H - SEQCRD C Y TYR TYR 13 13 H H - SEQCRD C R ARG ARG 14 14 H H - SEQCRD C L LEU LEU 15 15 H H - SEQCRD C T THR THR 16 16 H H - SEQCRD C V VAL VAL 17 17 H H - SEQCRD C I ILE ILE 18 18 H H - SEQCRD C I ILE ILE 19 19 H H - SEQCRD C D ASP ASP 20 20 H H - SEQCRD C D ASP ASP 21 21 H H - SEQCRD C R ARG ARG 22 22 H H - SEQCRD C Y TYR TYR 23 23 H H - SEQCRD C E GLU GLU 24 24 H H - SEQCRD C S SER SER 25 25 H H - SEQCRD C L LEU LEU 26 26 H H - SEQCRD C K LYS LYS 27 27 H H - SEQCRD C N ASN ASN 28 28 H H - SEQCRD C L LEU LEU 29 29 H H - SEQCRD C I ILE ILE 30 30 H H - SEQCRD C T THR THR 31 31 H H - SEQCRD C L LEU LEU 32 32 H H - SEQCRD C R ARG ARG 33 33 H H - SEQCRD C A ALA ALA 34 34 H H - SEQCRD C D ASP ASP 35 35 H H - SEQCRD C R ARG ARG 36 36 H H - SEQCRD C L LEU LEU 37 37 H H - SEQCRD C E GLU GLU 38 38 H H - SEQCRD C M MET MET 39 39 H H - SEQCRD C I ILE ILE 40 40 H H - SEQCRD C I ILE ILE 41 41 H H - SEQCRD C N ASN ASN 42 42 H H - SEQCRD C D ASP ASP 43 43 H H - SEQCRD C N ASN ASN 44 44 H H - SEQCRD C V VAL VAL 45 45 H H - SEQCRD C S SER SER 46 46 H H - SEQCRD C T THR THR 47 47 H H - SEQCRD C I ILE ILE 48 48 H H - SEQCRD C L LEU LEU 49 49 H H - SEQCRD C A ALA ALA 50 50 H H - SEQCRD C S SER SER 51 51 H C 5 SEQCRD C I ILE ILE 52 52 H C 5 SEQCRD A G GLY GLY 1 1 C C - SEQCRD A S SER SER 2 2 H C 5 SEQCRD A I ILE ILE 3 3 H H - SEQCRD A I ILE ILE 4 4 H H - SEQCRD A N ASN ASN 5 5 H H - SEQCRD A E GLU GLU 6 6 H H - SEQCRD A T THR THR 7 7 H H - SEQCRD A A ALA ALA 8 8 H H - SEQCRD A D ASP ASP 9 9 H H - SEQCRD A D ASP ASP 10 10 H H - SEQCRD A I ILE ILE 11 11 H H - SEQCRD A V VAL VAL 12 12 H H - SEQCRD A Y TYR TYR 13 13 H H - SEQCRD A R ARG ARG 14 14 H H - SEQCRD A L LEU LEU 15 15 H H - SEQCRD A T THR THR 16 16 H H - SEQCRD A V VAL VAL 17 17 H H - SEQCRD A I ILE ILE 18 18 H H - SEQCRD A I ILE ILE 19 19 H H - SEQCRD A D ASP ASP 20 20 H H - SEQCRD A D ASP ASP 21 21 H H - SEQCRD A R ARG ARG 22 22 H H - SEQCRD A Y TYR TYR 23 23 H H - SEQCRD A E GLU GLU 24 24 H H - SEQCRD A S SER SER 25 25 H H - SEQCRD A L LEU LEU 26 26 H H - SEQCRD A K LYS LYS 27 27 H H - SEQCRD A N ASN ASN 28 28 H H - SEQCRD A L LEU LEU 29 29 H H - SEQCRD A I ILE ILE 30 30 H H - SEQCRD A T THR THR 31 31 H H - SEQCRD A L LEU LEU 32 32 H H - SEQCRD A R ARG ARG 33 33 H H - SEQCRD A A ALA ALA 34 34 H H - SEQCRD A D ASP ASP 35 35 H H - SEQCRD A R ARG ARG 36 36 H H - SEQCRD A L LEU LEU 37 37 H H - SEQCRD A E GLU GLU 38 38 H H - SEQCRD A M MET MET 39 39 H H - SEQCRD A I ILE ILE 40 40 H H - SEQCRD A I ILE ILE 41 41 H H - SEQCRD A N ASN ASN 42 42 H H - SEQCRD A D ASP ASP 43 43 H H - SEQCRD A N ASN ASN 44 44 H H - SEQCRD A V VAL VAL 45 45 H H - SEQCRD A S SER SER 46 46 H H - SEQCRD A T THR THR 47 47 H H - SEQCRD A I ILE ILE 48 48 H H - SEQCRD A L LEU LEU 49 49 H H - SEQCRD A A ALA ALA 50 50 H H - SEQCRD A S SER SER 51 51 H H - SEQCRD A I ILE ILE 52 52 H C 5 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 3 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 7 PDB and STRIDE secondary structures differ S2CERR 6 3 PDB secondary structure is absent S2CERR 7 3 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.45 PARAME R-factor 0.211 PARAME B-factor 24.2 COMMNT COMMNT Reference database information: DATABA source: DATABA GB: AAC44118 (1374754) COMMNT DATABA mutation: DATABA SER B 2 --> ? ? 'CLONING ARTIFACT' DATABA SER A 2 --> ? ? 'CLONING ARTIFACT' DATABA SER D 2 --> ? ? 'CLONING ARTIFACT' DATABA GLY A 1 --> ? ? 'CLONING ARTIFACT' DATABA GLY C 1 --> ? ? 'CLONING ARTIFACT' DATABA SER C 2 --> ? ? 'CLONING ARTIFACT' DATABA GLY D 1 --> ? ? 'CLONING ARTIFACT' DATABA GLY B 1 --> ? ? 'CLONING ARTIFACT'