HEADSC 1ylm COMMNT S2C correlation file created: Thu Dec 29 11:38:58 EST 2005 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD B M MSE MSE 1 1 C C - SEQCRD B Y TYR TYR 2 2 C C - SEQCRD B F PHE PHE 3 3 C C - SEQCRD B V VAL VAL 4 4 C T 5 SEQCRD B D ASP ASP 5 5 H T 5 SEQCRD B R ARG ARG 6 6 H H - SEQCRD B S SER SER 7 7 H H - SEQCRD B K LYS LYS 8 8 H H - SEQCRD B I ILE ILE 9 9 H H - SEQCRD B E GLU GLU 10 10 H H - SEQCRD B K LYS LYS 11 11 H H - SEQCRD B T THR THR 12 12 H H - SEQCRD B L LEU LEU 13 13 H H - SEQCRD B G GLY GLY 14 14 H H - SEQCRD B F PHE PHE 15 15 H H - SEQCRD B F PHE PHE 16 16 H H - SEQCRD B E GLU GLU 17 17 H H - SEQCRD B H HIS HIS 18 18 H H - SEQCRD B Q GLN GLN 19 19 H H - SEQCRD B L LEU LEU 20 20 H H - SEQCRD B A ALA ALA 21 21 H H - SEQCRD B L LEU LEU 22 22 H H - SEQCRD B F PHE PHE 23 23 H H - SEQCRD B D ASP ASP 24 24 H T 5 SEQCRD B S SER SER 25 25 C T 5 SEQCRD B Q GLN GLN 26 26 C C - SEQCRD B T THR THR 27 27 C C - SEQCRD B D ASP ASP 28 28 C T 5 SEQCRD B W TRP TRP 29 29 C T 5 SEQCRD B Q GLN GLN 30 30 C T 5 SEQCRD B S SER SER 31 31 H T 5 SEQCRD B E GLU GLU 32 32 H H - SEQCRD B I ILE ILE 33 33 H H - SEQCRD B G GLY GLY 34 34 H H - SEQCRD B E GLU GLU 35 35 H H - SEQCRD B L LEU LEU 36 36 H H - SEQCRD B A ALA ALA 37 37 H H - SEQCRD B L LEU LEU 38 38 H H - SEQCRD B Q GLN GLN 39 39 H H - SEQCRD B R ARG ARG 40 40 H H - SEQCRD B I ILE ILE 41 41 H H - SEQCRD B G GLY GLY 42 42 H H - SEQCRD B H HIS HIS 43 43 H H - SEQCRD B L LEU LEU 44 44 H H - SEQCRD B L LEU LEU 45 45 H H - SEQCRD B I ILE ILE 46 46 H H - SEQCRD B E GLU GLU 47 47 H H - SEQCRD B C CYS CYS 48 48 H H - SEQCRD B I ILE ILE 49 49 H H - SEQCRD B L LEU LEU 50 50 H H - SEQCRD B D ASP ASP 51 51 H H - SEQCRD B T THR THR 52 52 H H - SEQCRD B G GLY GLY 53 53 H H - SEQCRD B N ASN ASN 54 54 H H - SEQCRD B D ASP ASP 55 55 H H - SEQCRD B M MSE MSE 56 56 H H - SEQCRD B I ILE ILE 57 57 H H - SEQCRD B D ASP ASP 58 58 H H - SEQCRD B G GLY GLY 59 59 H H - SEQCRD B F PHE PHE 60 60 H H - SEQCRD B I ILE ILE 61 61 C C - SEQCRD B M MSE MSE 62 62 C C - SEQCRD B R ARG ARG 63 63 C C - SEQCRD B D ASP ASP 64 64 C C - SEQCRD B P PRO PRO 65 65 C C - SEQCRD B G GLY GLY 66 66 C C - SEQCRD B S SER SER 67 67 H C 5 SEQCRD B Y TYR TYR 68 68 H H - SEQCRD B D ASP ASP 69 69 H H - SEQCRD B D ASP ASP 70 70 H H - SEQCRD B I ILE ILE 71 71 H H - SEQCRD B M MSE MSE 72 72 H H - SEQCRD B D ASP ASP 73 73 H H - SEQCRD B I ILE ILE 74 74 H H - SEQCRD B L LEU LEU 75 75 H H - SEQCRD B V VAL VAL 76 76 H H - SEQCRD B D ASP ASP 77 77 H H - SEQCRD B E GLU GLU 78 78 H H - SEQCRD B K LYS LYS 79 79 C T 5 SEQCRD B V VAL VAL 80 80 C T 5 SEQCRD B V VAL VAL 81 81 C T 5 SEQCRD B T THR THR 82 82 H T 5 SEQCRD B E GLU GLU 83 83 H H - SEQCRD B K LYS LYS 84 84 H H - SEQCRD B E GLU GLU 85 85 H H - SEQCRD B G GLY GLY 86 86 H H - SEQCRD B D ASP ASP 87 87 H H - SEQCRD B E GLU GLU 88 88 H H - SEQCRD B L LEU LEU 89 89 H H - SEQCRD B K LYS LYS 90 90 H H - SEQCRD B K LYS LYS 91 91 H H - SEQCRD B L LEU LEU 92 92 H H - SEQCRD B I ILE ILE 93 93 H H - SEQCRD B A ALA ALA 94 94 H H - SEQCRD B Y TYR TYR 95 95 H H - SEQCRD B R ARG ARG 96 96 H H - SEQCRD B K LYS LYS 97 97 H H - SEQCRD B T THR THR 98 98 H H - SEQCRD B L LEU LEU 99 99 H H - SEQCRD B V VAL VAL 100 100 H H - SEQCRD B Q GLN GLN 101 101 H H - SEQCRD B Q GLN GLN 102 102 H C 5 SEQCRD B Y TYR TYR 103 103 H G 5 SEQCRD B L LEU LEU 104 104 H G 5 SEQCRD B L LEU LEU 105 105 H G 5 SEQCRD B A ALA ALA 106 106 H C 5 SEQCRD B D ASP ASP 107 107 H C 5 SEQCRD B S SER SER 108 108 H H - SEQCRD B G GLY GLY 109 109 H H - SEQCRD B E GLU GLU 110 110 H H - SEQCRD B L LEU LEU 111 111 H H - SEQCRD B Y TYR TYR 112 112 H H - SEQCRD B R ARG ARG 113 113 H H - SEQCRD B L LEU LEU 114 114 H H - SEQCRD B I ILE ILE 115 115 H H - SEQCRD B K LYS LYS 116 116 H H - SEQCRD B A ALA ALA 117 117 H H - SEQCRD B H HIS HIS 118 118 H H - SEQCRD B Q GLN GLN 119 119 H H - SEQCRD B T THR THR 120 120 H H - SEQCRD B A ALA ALA 121 121 H H - SEQCRD B L LEU LEU 122 122 H H - SEQCRD B Q GLN GLN 123 123 H H - SEQCRD B D ASP ASP 124 124 H H - SEQCRD B F PHE PHE 125 125 H H - SEQCRD B P PRO PRO 126 126 H H - SEQCRD B K LYS LYS 127 127 H H - SEQCRD B R ARG ARG 128 128 H H - SEQCRD B I ILE ILE 129 129 H H - SEQCRD B R ARG ARG 130 130 H H - SEQCRD B S SER SER 131 131 H H - SEQCRD B Y TYR TYR 132 132 H H - SEQCRD B L LEU LEU 133 133 H H - SEQCRD B E GLU GLU 134 134 H H - SEQCRD B T THR THR 135 135 H H - SEQCRD B E GLU GLU 136 136 H H - SEQCRD B L LEU LEU 137 137 H H - SEQCRD B G GLY GLY 138 138 H T 5 SEQCRD B P PRO PRO 139 139 C T 5 SEQCRD B V VAL VAL 140 140 C T 5 SEQCRD B S SER SER 141 141 C T 5 SEQCRD B A ALA ALA 142 142 C C - SEQCRD B F PHE PHE 143 143 C C - SEQCRD B K LYS --- 144 - - - 367 SEQCRD A M MSE MSE 1 1 C C - SEQCRD A Y TYR TYR 2 2 C C - SEQCRD A F PHE PHE 3 3 C C - SEQCRD A V VAL VAL 4 4 C T 5 SEQCRD A D ASP ASP 5 5 H T 5 SEQCRD A R ARG ARG 6 6 H H - SEQCRD A S SER SER 7 7 H H - SEQCRD A K LYS LYS 8 8 H H - SEQCRD A I ILE ILE 9 9 H H - SEQCRD A E GLU GLU 10 10 H H - SEQCRD A K LYS LYS 11 11 H H - SEQCRD A T THR THR 12 12 H H - SEQCRD A L LEU LEU 13 13 H H - SEQCRD A G GLY GLY 14 14 H H - SEQCRD A F PHE PHE 15 15 H H - SEQCRD A F PHE PHE 16 16 H H - SEQCRD A E GLU GLU 17 17 H H - SEQCRD A H HIS HIS 18 18 H H - SEQCRD A Q GLN GLN 19 19 H H - SEQCRD A L LEU LEU 20 20 H H - SEQCRD A A ALA ALA 21 21 H H - SEQCRD A L LEU LEU 22 22 H H - SEQCRD A F PHE PHE 23 23 H H - SEQCRD A D ASP ASP 24 24 H H - SEQCRD A S SER SER 25 25 C T 5 SEQCRD A Q GLN GLN 26 26 C T 5 SEQCRD A T THR THR 27 27 C T 5 SEQCRD A D ASP ASP 28 28 C T 5 SEQCRD A W TRP TRP 29 29 C T 5 SEQCRD A Q GLN GLN 30 30 C T 5 SEQCRD A S SER SER 31 31 H T 5 SEQCRD A E GLU GLU 32 32 H H - SEQCRD A I ILE ILE 33 33 H H - SEQCRD A G GLY GLY 34 34 H H - SEQCRD A E GLU GLU 35 35 H H - SEQCRD A L LEU LEU 36 36 H H - SEQCRD A A ALA ALA 37 37 H H - SEQCRD A L LEU LEU 38 38 H H - SEQCRD A Q GLN GLN 39 39 H H - SEQCRD A R ARG ARG 40 40 H H - SEQCRD A I ILE ILE 41 41 H H - SEQCRD A G GLY GLY 42 42 H H - SEQCRD A H HIS HIS 43 43 H H - SEQCRD A L LEU LEU 44 44 H H - SEQCRD A L LEU LEU 45 45 H H - SEQCRD A I ILE ILE 46 46 H H - SEQCRD A E GLU GLU 47 47 H H - SEQCRD A C CYS CYS 48 48 H H - SEQCRD A I ILE ILE 49 49 H H - SEQCRD A L LEU LEU 50 50 H H - SEQCRD A D ASP ASP 51 51 H H - SEQCRD A T THR THR 52 52 H H - SEQCRD A G GLY GLY 53 53 H H - SEQCRD A N ASN ASN 54 54 H H - SEQCRD A D ASP ASP 55 55 H H - SEQCRD A M MSE MSE 56 56 H H - SEQCRD A I ILE ILE 57 57 H H - SEQCRD A D ASP ASP 58 58 H H - SEQCRD A G GLY GLY 59 59 H H - SEQCRD A F PHE PHE 60 60 H H - SEQCRD A I ILE ILE 61 61 C C - SEQCRD A M MSE MSE 62 62 C C - SEQCRD A R ARG ARG 63 63 C C - SEQCRD A D ASP ASP 64 64 C C - SEQCRD A P PRO PRO 65 65 C T 5 SEQCRD A G GLY GLY 66 66 C T 5 SEQCRD A S SER SER 67 67 H T 5 SEQCRD A Y TYR TYR 68 68 H G 5 SEQCRD A D ASP ASP 69 69 H G 5 SEQCRD A D ASP ASP 70 70 H G 5 SEQCRD A I ILE ILE 71 71 H H - SEQCRD A M MSE MSE 72 72 H H - SEQCRD A D ASP ASP 73 73 H H - SEQCRD A I ILE ILE 74 74 H H - SEQCRD A L LEU LEU 75 75 H H - SEQCRD A V VAL VAL 76 76 H H - SEQCRD A D ASP ASP 77 77 H H - SEQCRD A E GLU GLU 78 78 H H - SEQCRD A K LYS LYS 79 79 C T 5 SEQCRD A V VAL VAL 80 80 C T 5 SEQCRD A V VAL VAL 81 81 C T 5 SEQCRD A T THR THR 82 82 H T 5 SEQCRD A E GLU GLU 83 83 H H - SEQCRD A K LYS LYS 84 84 H H - SEQCRD A E GLU GLU 85 85 H H - SEQCRD A G GLY GLY 86 86 H H - SEQCRD A D ASP ASP 87 87 H H - SEQCRD A E GLU GLU 88 88 H H - SEQCRD A L LEU LEU 89 89 H H - SEQCRD A K LYS LYS 90 90 H H - SEQCRD A K LYS LYS 91 91 H H - SEQCRD A L LEU LEU 92 92 H H - SEQCRD A I ILE ILE 93 93 H H - SEQCRD A A ALA ALA 94 94 H H - SEQCRD A Y TYR TYR 95 95 H H - SEQCRD A R ARG ARG 96 96 H H - SEQCRD A K LYS LYS 97 97 H H - SEQCRD A T THR THR 98 98 H H - SEQCRD A L LEU LEU 99 99 H H - SEQCRD A V VAL VAL 100 100 H H - SEQCRD A Q GLN GLN 101 101 H H - SEQCRD A Q GLN GLN 102 102 H C 5 SEQCRD A Y TYR TYR 103 103 H G 5 SEQCRD A L LEU LEU 104 104 H G 5 SEQCRD A L LEU LEU 105 105 H G 5 SEQCRD A A ALA ALA 106 106 H C 5 SEQCRD A D ASP ASP 107 107 H C 5 SEQCRD A S SER SER 108 108 H H - SEQCRD A G GLY GLY 109 109 H H - SEQCRD A E GLU GLU 110 110 H H - SEQCRD A L LEU LEU 111 111 H H - SEQCRD A Y TYR TYR 112 112 H H - SEQCRD A R ARG ARG 113 113 H H - SEQCRD A L LEU LEU 114 114 H H - SEQCRD A I ILE ILE 115 115 H H - SEQCRD A K LYS LYS 116 116 H H - SEQCRD A A ALA ALA 117 117 H H - SEQCRD A H HIS HIS 118 118 H H - SEQCRD A Q GLN GLN 119 119 H H - SEQCRD A T THR THR 120 120 H H - SEQCRD A A ALA ALA 121 121 H H - SEQCRD A L LEU LEU 122 122 H H - SEQCRD A Q GLN GLN 123 123 H H - SEQCRD A D ASP ASP 124 124 H H - SEQCRD A F PHE PHE 125 125 H H - SEQCRD A P PRO PRO 126 126 H H - SEQCRD A K LYS LYS 127 127 H H - SEQCRD A R ARG ARG 128 128 H H - SEQCRD A I ILE ILE 129 129 H H - SEQCRD A R ARG ARG 130 130 H H - SEQCRD A S SER SER 131 131 H H - SEQCRD A Y TYR TYR 132 132 H H - SEQCRD A L LEU LEU 133 133 H H - SEQCRD A E GLU GLU 134 134 H H - SEQCRD A T THR THR 135 135 H H - SEQCRD A E GLU GLU 136 136 H H - SEQCRD A L LEU LEU 137 137 H H - SEQCRD A G GLY GLY 138 138 H T 5 SEQCRD A P PRO PRO 139 139 C T 5 SEQCRD A V VAL VAL 140 140 C T 5 SEQCRD A S SER SER 141 141 C T 5 SEQCRD A A ALA ALA 142 142 C C - SEQCRD A F PHE PHE 143 143 C C - SEQCRD A K LYS --- 144 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 2 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 52 PDB and STRIDE secondary structures differ S2CERR 6 2 PDB secondary structure is absent S2CERR 7 2 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.83 PARAME R-factor 0.20165 PARAME B-factor 24.399 COMMNT COMMNT Reference database information: DATABA source: DATABA GB: NP_391110 (16080283) COMMNT DATABA mutation: DATABA MSE A 1 --> MET 1 'MODIFIED RESIDUE' DATABA MSE A 56 --> MET 56 'MODIFIED RESIDUE' DATABA MSE B 56 --> MET 56 'MODIFIED RESIDUE' DATABA MSE A 62 --> MET 62 'MODIFIED RESIDUE' DATABA MSE B 72 --> MET 72 'MODIFIED RESIDUE' DATABA MSE B 1 --> MET 1 'MODIFIED RESIDUE' DATABA MSE B 62 --> MET 62 'MODIFIED RESIDUE' DATABA MSE A 72 --> MET 72 'MODIFIED RESIDUE'