HEADSC 2dyo COMMNT S2C correlation file created: Sun May 16 21:56:24 EDT 2010 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD B M MET --- 1 - - - 367 SEQCRD B G GLY --- 2 - - - 367 SEQCRD B N ASN --- 3 - - - 367 SEQCRD B F PHE --- 4 - - - 367 SEQCRD B I ILE --- 5 - - - 367 SEQCRD B I ILE --- 6 - - - 367 SEQCRD B T THR --- 7 - - - 367 SEQCRD B E GLU --- 8 - - - 367 SEQCRD B R ARG --- 9 - - - 367 SEQCRD B K LYS --- 10 - - - 367 SEQCRD B K LYS --- 11 - - - 367 SEQCRD B A ALA --- 12 - - - 367 SEQCRD B K LYS --- 13 - - - 367 SEQCRD B E GLU --- 14 - - - 367 SEQCRD B E GLU --- 15 - - - 367 SEQCRD B R ARG --- 16 - - - 367 SEQCRD B S SER --- 17 - - - 367 SEQCRD B N ASN --- 18 - - - 367 SEQCRD B P PRO --- 19 - - - 367 SEQCRD B Q GLN --- 20 - - - 367 SEQCRD B T THR --- 21 - - - 367 SEQCRD B D ASP ASP 22 22 H H - SEQCRD B S SER SER 23 23 H H - SEQCRD B M MET MET 24 24 H H - SEQCRD B D ASP ASP 25 25 H H - SEQCRD B D ASP ASP 26 26 H H - SEQCRD B L LEU LEU 27 27 H H - SEQCRD B L LEU LEU 28 28 H H - SEQCRD B I ILE ILE 29 29 H H - SEQCRD B R ARG ARG 30 30 H H - SEQCRD B R ARG ARG 31 31 H H - SEQCRD B L LEU LEU 32 32 H H - SEQCRD B T THR THR 33 33 H H - SEQCRD B D ASP ASP 34 34 H H - SEQCRD B R ARG ARG 35 35 H H - SEQCRD B N ASN ASN 36 36 H H - SEQCRD B D ASP ASP 37 37 H H - SEQCRD B K LYS LYS 38 38 H H - SEQCRD B E GLU GLU 39 39 H H - SEQCRD B A ALA ALA 40 40 H H - SEQCRD B H HIS HIS 41 41 H T 5 SEQCRD B L LEU LEU 42 42 H T 5 SEQCRD B N ASN ASN 43 43 H G 5 SEQCRD B E GLU GLU 44 44 H G 5 SEQCRD B L LEU LEU 45 45 H G 5 SEQCRD B F PHE PHE 46 46 H C 5 SEQCRD B Q GLN GLN 47 47 C T 5 SEQCRD B D ASP ASP 48 48 C T 5 SEQCRD B N ASN ASN 49 49 C T 5 SEQCRD B S SER SER 50 50 C T 5 SEQCRD B G GLY GLY 51 51 C T 5 SEQCRD B A ALA ALA 52 52 C T 5 SEQCRD B I ILE ILE 53 53 C T 5 SEQCRD B G GLY GLY 54 54 C T 5 SEQCRD B G GLY GLY 55 55 C T 5 SEQCRD B N ASN ASN 56 56 C C - SEQCRD B I ILE ILE 57 57 C C - SEQCRD A G GLY --- 1 - - - 367 SEQCRD A A ALA --- 2 - - - 367 SEQCRD A H HIS HIS 3 0 H C 45 SEQCRD A M MET MET 4 1 H H 4 SEQCRD A N ASN ASN 5 2 H H 4 SEQCRD A D ASP ASP 6 3 H H 4 SEQCRD A I ILE ILE 7 4 H H 4 SEQCRD A K LYS LYS 8 5 H H 4 SEQCRD A Q GLN GLN 9 6 H H 4 SEQCRD A L LEU LEU 10 7 H H 4 SEQCRD A L LEU LEU 11 8 H H 4 SEQCRD A W TRP TRP 12 9 H H 4 SEQCRD A N ASN ASN 13 10 H H 4 SEQCRD A G GLY GLY 14 11 C C 4 SEQCRD A E GLU GLU 15 12 E E 4 SEQCRD A L LEU LEU 16 13 E E 4 SEQCRD A N ASN ASN 17 14 E E 4 SEQCRD A V VAL VAL 18 15 E E 4 SEQCRD A L LEU LEU 19 16 E E 4 SEQCRD A V VAL VAL 20 17 E E 4 SEQCRD A S SER SER 21 18 E E 4 SEQCRD A I ILE ILE 22 19 E E 4 SEQCRD A D ASP ASP 23 20 C C 4 SEQCRD A P PRO PRO 24 21 H G 45 SEQCRD A S SER SER 25 22 H G 45 SEQCRD A F PHE PHE 26 23 H G 45 SEQCRD A L LEU LEU 27 24 H B 45 SEQCRD A M MET MET 28 25 C T 45 SEQCRD A K LYS LYS 29 26 C T 45 SEQCRD A G GLY GLY 30 27 C T 45 SEQCRD A S SER SER 31 28 C T 45 SEQCRD A P PRO PRO 32 29 H C 45 SEQCRD A R ARG ARG 33 30 H G 45 SEQCRD A E GLU GLU 34 31 H G 45 SEQCRD A I ILE ILE 35 32 H G 45 SEQCRD A A ALA ALA 36 33 C G 45 SEQCRD A V VAL VAL 37 34 E E 4 SEQCRD A L LEU LEU 38 35 E E 4 SEQCRD A R ARG ARG 39 36 E E 4 SEQCRD A I ILE ILE 40 37 E E 4 SEQCRD A R ARG ARG 41 38 E E 4 SEQCRD A V VAL VAL 42 39 E E 4 SEQCRD A P PRO PRO 43 40 E E 4 SEQCRD A R ARG ARG 44 41 C T 45 SEQCRD A E GLU GLU 45 42 C T 45 SEQCRD A T THR THR 46 43 C T 45 SEQCRD A Y TYR TYR 47 44 H C 45 SEQCRD A L LEU LEU 48 45 H G 45 SEQCRD A V VAL VAL 49 46 H G 45 SEQCRD A N ASN ASN 50 47 H G 45 SEQCRD A Y TYR TYR 51 48 H G 45 SEQCRD A M MET MET 52 49 H H 4 SEQCRD A P PRO PRO 53 50 H H 4 SEQCRD A L LEU LEU 54 51 H H 4 SEQCRD A I ILE ILE 55 52 H H 4 SEQCRD A W TRP TRP 56 53 H H 4 SEQCRD A N ASN ASN 57 54 H H 4 SEQCRD A K LYS LYS 58 55 H H 4 SEQCRD A I ILE ILE 59 56 H H 4 SEQCRD A K LYS LYS 60 57 H G 45 SEQCRD A S SER SER 61 58 H G 45 SEQCRD A F PHE PHE 62 59 H G 45 SEQCRD A L LEU LEU 63 60 H B 45 SEQCRD A S SER SER 64 61 C C 4 SEQCRD A F PHE PHE 65 62 C C 4 SEQCRD A D ASP ASP 66 63 C C 4 SEQCRD A P PRO PRO 67 64 C C 4 SEQCRD A L LEU --- 68 - - - 367 SEQCRD A T THR --- 69 - - - 367 SEQCRD A D ASP --- 70 - - - 367 SEQCRD A S SER --- 71 - - - 367 SEQCRD A E GLU GLU 72 69 C C 4 SEQCRD A K LYS LYS 73 70 C C 4 SEQCRD A Y TYR TYR 74 71 E E 4 SEQCRD A F PHE PHE 75 72 E E 4 SEQCRD A W TRP TRP 76 73 E E 4 SEQCRD A F PHE PHE 77 74 E E 4 SEQCRD A E GLU GLU 78 75 E E 4 SEQCRD A H HIS HIS 79 76 E E 4 SEQCRD A N ASN ASN 80 77 C T 45 SEQCRD A K LYS LYS 81 78 C T 45 SEQCRD A T THR THR 82 79 E E 4 SEQCRD A P PRO PRO 83 80 E E 4 SEQCRD A I ILE ILE 84 81 E C 45 SEQCRD A P PRO PRO 85 82 C T 45 SEQCRD A W TRP TRP 86 83 C T 45 SEQCRD A N ASN ASN 87 84 C T 45 SEQCRD A Y TYR TYR 88 85 C T 45 SEQCRD A P PRO PRO 89 86 H C 45 SEQCRD A V VAL VAL 90 87 H H 4 SEQCRD A G GLY GLY 91 88 H H 4 SEQCRD A V VAL VAL 92 89 H H 4 SEQCRD A L LEU LEU 93 90 H H 4 SEQCRD A F PHE PHE 94 91 H H 4 SEQCRD A D ASP ASP 95 92 H H 4 SEQCRD A C CYS CYS 96 93 H H 4 SEQCRD A L LEU LEU 97 94 H H 4 SEQCRD A A ALA ALA 98 95 H H 4 SEQCRD A G GLY GLY 99 96 H T 45 SEQCRD A K LYS LYS 100 97 H T 45 SEQCRD A S SER SER 101 98 H T 45 SEQCRD A A ALA ALA 102 99 H T 45 SEQCRD A T THR --- 103 - - - 367 SEQCRD A F PHE --- 104 - - - 367 SEQCRD A T THR --- 105 - - - 367 SEQCRD A T THR --- 106 - - - 367 SEQCRD A S SER --- 107 - - - 367 SEQCRD A F PHE --- 108 - - - 367 SEQCRD A E GLU --- 109 - - - 367 SEQCRD A N ASN --- 110 - - - 367 SEQCRD A Q GLN --- 111 - - - 367 SEQCRD A V VAL VAL 112 109 C C 4 SEQCRD A K LYS LYS 113 110 C C 4 SEQCRD A D ASP ASP 114 111 C C 4 SEQCRD A V VAL VAL 115 112 C C 4 SEQCRD A L LEU LEU 116 113 C C 4 SEQCRD A T THR THR 117 114 C C 4 SEQCRD A F PHE PHE 118 115 E E 4 SEQCRD A L LEU LEU 119 116 E E 4 SEQCRD A R ARG ARG 120 117 E E 4 SEQCRD A I ILE ILE 121 118 E E 4 SEQCRD A H HIS HIS 122 119 E E 4 SEQCRD A L LEU LEU 123 120 E E 4 SEQCRD A V VAL VAL 124 121 E E 4 SEQCRD A M MET MET 125 122 E E 4 SEQCRD A G GLY GLY 126 123 E E 4 SEQCRD A D ASP ASP 127 124 C T 45 SEQCRD A S SER SER 128 125 C T 45 SEQCRD A L LEU LEU 129 126 C T 45 SEQCRD A P PRO PRO 130 127 C T 45 SEQCRD A P PRO PRO 131 128 C T 45 SEQCRD A T THR THR 132 129 C T 45 SEQCRD A I ILE ILE 133 130 C T 45 SEQCRD A I ILE ILE 134 131 C C 4 SEQCRD A P PRO PRO 135 132 C C 4 SEQCRD A I ILE ILE 136 133 C B 45 SEQCRD A A ALA ALA 137 134 C C 4 SEQCRD A S SER SER 138 135 C C 4 SEQCRD A S SER SER 139 136 C C 4 SEQCRD A K LYS LYS 140 137 C C 4 SEQCRD A T THR THR 141 138 H H 4 SEQCRD A Q GLN GLN 142 139 H H 4 SEQCRD A A ALA ALA 143 140 H H 4 SEQCRD A E GLU GLU 144 141 H H 4 SEQCRD A K LYS LYS 145 142 H H 4 SEQCRD A F PHE PHE 146 143 H H 4 SEQCRD A W TRP TRP 147 144 H H 4 SEQCRD A F PHE PHE 148 145 H H 4 SEQCRD A H HIS HIS 149 146 H H 4 SEQCRD A Q GLN GLN 150 147 H H 4 SEQCRD A W TRP TRP 151 148 H H 4 SEQCRD A K LYS LYS 152 149 H H 4 SEQCRD A Q GLN GLN 153 150 H H 4 SEQCRD A V VAL VAL 154 151 H H 4 SEQCRD A C CYS CYS 155 152 H H 4 SEQCRD A F PHE PHE 156 153 H H 4 SEQCRD A I ILE ILE 157 154 H H 4 SEQCRD A L LEU LEU 158 155 H H 4 SEQCRD A N ASN ASN 159 156 H H 4 SEQCRD A G GLY GLY 160 157 H C 45 SEQCRD A S SER SER 161 158 C C 4 SEQCRD A S SER SER 162 159 H H 4 SEQCRD A K LYS LYS 163 160 H H 4 SEQCRD A A ALA ALA 164 161 H H 4 SEQCRD A I ILE ILE 165 162 H H 4 SEQCRD A M MET MET 166 163 H H 4 SEQCRD A S SER SER 167 164 H H 4 SEQCRD A L LEU LEU 168 165 C C 4 SEQCRD A S SER SER 169 166 H C 45 SEQCRD A V VAL VAL 170 167 H H 4 SEQCRD A N ASN ASN 171 168 H H 4 SEQCRD A E GLU GLU 172 169 H H 4 SEQCRD A A ALA ALA 173 170 H H 4 SEQCRD A R ARG ARG 174 171 H H 4 SEQCRD A K LYS LYS 175 172 H H 4 SEQCRD A F PHE PHE 176 173 H H 4 SEQCRD A W TRP TRP 177 174 H H 4 SEQCRD A G GLY GLY 178 175 H H 4 SEQCRD A S SER SER 179 176 H H 4 SEQCRD A V VAL VAL 180 177 H H 4 SEQCRD A I ILE ILE 181 178 H H 4 SEQCRD A T THR THR 182 179 H H 4 SEQCRD A R ARG ARG 183 180 H C 45 SEQCRD A N ASN ASN 184 181 H C 45 SEQCRD A F PHE PHE 185 182 H H 4 SEQCRD A Q GLN GLN 186 183 H H 4 SEQCRD A D ASP ASP 187 184 H H 4 SEQCRD A F PHE PHE 188 185 H H 4 SEQCRD A I ILE ILE 189 186 H H 4 SEQCRD A E GLU GLU 190 187 H H 4 SEQCRD A I ILE ILE 191 188 H H 4 SEQCRD A S SER SER 192 189 H H 4 SEQCRD A N ASN ASN 193 190 H H 4 SEQCRD A K LYS LYS 194 191 H H 4 SEQCRD A I ILE ILE 195 192 H H 4 SEQCRD A S SER SER 196 193 H C 45 SEQCRD A S SER SER 197 194 C C 4 SEQCRD A S SER SER 198 195 C C 4 SEQCRD A R ARG ARG 199 196 C C 4 SEQCRD A P PRO PRO 200 197 C T 45 SEQCRD A R ARG ARG 201 198 C T 45 SEQCRD A H HIS HIS 202 199 C B 45 SEQCRD A I ILE ILE 203 200 C T 45 SEQCRD A P PRO PRO 204 201 C C 4 SEQCRD A L LEU LEU 205 202 E E 4 SEQCRD A I ILE ILE 206 203 E E 4 SEQCRD A I ILE ILE 207 204 E E 4 SEQCRD A Q GLN GLN 208 205 E E 4 SEQCRD A T THR THR 209 206 C C 4 SEQCRD A S SER SER 210 207 C T 45 SEQCRD A R ARG ARG 211 208 C T 45 SEQCRD A T THR THR 212 209 C T 45 SEQCRD A S SER SER 213 210 C T 45 SEQCRD A G GLY GLY 214 211 C C 4 SEQCRD A T THR THR 215 212 C C 4 SEQCRD A F PHE PHE 216 213 C C 4 SEQCRD A R ARG ARG 217 214 C C 4 SEQCRD A I ILE ILE 218 215 E E 4 SEQCRD A S SER SER 219 216 E E 4 SEQCRD A Q GLN GLN 220 217 C C 4 SEQCRD A P PRO PRO 221 218 C C 4 SEQCRD A T THR THR 222 219 C C 4 SEQCRD A I ILE ILE 223 220 C C 4 SEQCRD A S SER SER 224 221 C B 45 SEQCRD A M MET MET 225 222 C T 45 SEQCRD A T THR THR 226 223 C T 45 SEQCRD A G GLY GLY 227 224 C T 45 SEQCRD A V VAL VAL 228 225 C T 45 SEQCRD A N ASN ASN 229 226 C C 4 SEQCRD A P PRO PRO 230 227 C C 4 SEQCRD A T THR THR 231 228 C B 45 SEQCRD A L LEU LEU 232 229 H G 45 SEQCRD A K LYS LYS 233 230 H G 45 SEQCRD A D ASP ASP 234 231 H G 45 SEQCRD A I ILE ILE 235 232 H G 45 SEQCRD A E GLU GLU 236 233 H H 4 SEQCRD A G GLY GLY 237 234 H H 4 SEQCRD A D ASP ASP 238 235 H H 4 SEQCRD A I ILE ILE 239 236 H H 4 SEQCRD A L LEU LEU 240 237 H C 45 SEQCRD A D ASP ASP 241 238 C C 4 SEQCRD A V VAL VAL 242 239 C G 45 SEQCRD A K LYS LYS 243 240 C G 45 SEQCRD A E GLU GLU 244 241 C G 45 SEQCRD A G GLY GLY 245 242 C C 4 SEQCRD A I ILE --- 246 - - - 367 SEQCRD A N ASN --- 247 - - - 367 SEQCRD A G GLY --- 248 - - - 367 SEQCRD A N ASN --- 249 - - - 367 SEQCRD A D ASP ASP 250 247 C C 4 SEQCRD A V VAL VAL 251 248 E E 4 SEQCRD A M MET MET 252 249 E E 4 SEQCRD A V VAL VAL 253 250 E E 4 SEQCRD A I ILE ILE 254 251 E E 4 SEQCRD A C CYS CYS 255 252 E E 4 SEQCRD A Q GLN GLN 256 253 C T 45 SEQCRD A G GLY GLY 257 254 C T 45 SEQCRD A I ILE ILE 258 255 E E 4 SEQCRD A E GLU GLU 259 256 E E 4 SEQCRD A I ILE ILE 260 257 E E 4 SEQCRD A P PRO PRO 261 258 C T 45 SEQCRD A W TRP TRP 262 259 C T 45 SEQCRD A H HIS HIS 263 260 C T 45 SEQCRD A M MET MET 264 261 C T 45 SEQCRD A L LEU LEU 265 262 H B 45 SEQCRD A L LEU LEU 266 263 H H 4 SEQCRD A Y TYR TYR 267 264 H H 4 SEQCRD A D ASP ASP 268 265 H H 4 SEQCRD A L LEU LEU 269 266 H H 4 SEQCRD A Y TYR TYR 270 267 H H 4 SEQCRD A S SER SER 271 268 H H 4 SEQCRD A K LYS LYS 272 269 H H 4 SEQCRD A L LEU LEU 273 270 H H 4 SEQCRD A R ARG ARG 274 271 H C 45 SEQCRD A S SER SER 275 272 C T 45 SEQCRD A F PHE PHE 276 273 C T 45 SEQCRD A D ASP ASP 277 274 C T 45 SEQCRD A G GLY GLY 278 275 C T 45 SEQCRD A F PHE PHE 279 276 C C 4 SEQCRD A L LEU LEU 280 277 E E 4 SEQCRD A Y TYR TYR 281 278 E E 4 SEQCRD A I ILE ILE 282 279 E E 4 SEQCRD A T THR THR 283 280 E E 4 SEQCRD A L LEU LEU 284 281 E E 4 SEQCRD A V VAL VAL 285 282 E E 4 SEQCRD A P PRO PRO 286 283 E E 4 SEQCRD A I ILE ILE 287 284 C C 4 SEQCRD A K LYS LYS 288 285 C C 4 SEQCRD A G GLY --- 289 - - - 367 SEQCRD A G GLY --- 290 - - - 367 SEQCRD A D ASP --- 291 - - - 367 SEQCRD A K LYS --- 292 - - - 367 SEQCRD A A ALA --- 293 - - - 367 SEQCRD A S SER --- 294 - - - 367 SEQCRD A S SER --- 295 - - - 367 SEQCRD A E GLU --- 296 - - - 367 SEQCRD A L LEU --- 297 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 49 No ATOM record S2CERR 4 269 SEQRES and ATOM residue numbers differ S2CERR 5 100 PDB and STRIDE secondary structures differ S2CERR 6 49 PDB secondary structure is absent S2CERR 7 49 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.97 PARAME R-factor 0.215 PARAME B-factor 34.6 COMMNT COMMNT Reference database information: DATABA source: DATABA UNP: ATG5_YEAST (Q12380) DATABA UNP: ATG16_YEAST (Q03818) COMMNT DATABA mutation: DATABA GLY A 1 --> ? ? 'CLONING ARTIFACT' DATABA ALA A 2 --> ? ? 'CLONING ARTIFACT' DATABA HIS A 3 --> ? ? 'CLONING ARTIFACT'