HEADSC 2gbj COMMNT S2C correlation file created: Sat May 20 09:14:35 EDT 2006 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A M MET MET 1 1 C C - SEQCRD A Q GLN GLN 2 2 E E - SEQCRD A I ILE ILE 3 3 E E - SEQCRD A F PHE PHE 4 4 E E - SEQCRD A V VAL VAL 5 5 E E - SEQCRD A K LYS LYS 6 6 E E - SEQCRD A T THR THR 7 7 E E - SEQCRD A L LEU LEU 8 8 C C - SEQCRD A T THR THR 9 9 C C - SEQCRD A G GLY GLY 10 10 C T 5 SEQCRD A G GLY GLY 11 11 C T 5 SEQCRD A G GLY GLY 12 12 C T 5 SEQCRD A G GLY GLY 13 13 C T 5 SEQCRD A G GLY GLY 14 14 C C - SEQCRD A G GLY GLY 15 15 C C - SEQCRD A G GLY GLY 16 16 C C - SEQCRD A G GLY GLY 17 17 C C - SEQCRD A G GLY GLY 18 18 C C - SEQCRD A K LYS LYS 19 19 C C - SEQCRD A T THR THR 20 20 E E - SEQCRD A I ILE ILE 21 21 E E - SEQCRD A T THR THR 22 22 E E - SEQCRD A L LEU LEU 23 23 E E - SEQCRD A E GLU GLU 24 24 E E - SEQCRD A V VAL VAL 25 25 C C - SEQCRD A E GLU GLU 26 26 C T 5 SEQCRD A P PRO PRO 27 27 C T 5 SEQCRD A S SER SER 28 28 C T 5 SEQCRD A D ASP ASP 29 29 C T 5 SEQCRD A T THR THR 30 30 H B 5 SEQCRD A I ILE ILE 31 31 H H - SEQCRD A E GLU GLU 32 32 H H - SEQCRD A N ASN ASN 33 33 H H - SEQCRD A V VAL VAL 34 34 H H - SEQCRD A K LYS LYS 35 35 H H - SEQCRD A A ALA ALA 36 36 H H - SEQCRD A K LYS LYS 37 37 H H - SEQCRD A I ILE ILE 38 38 H H - SEQCRD A Q GLN GLN 39 39 H H - SEQCRD A D ASP ASP 40 40 H H - SEQCRD A K LYS LYS 41 41 H H - SEQCRD A E GLU GLU 42 42 H H - SEQCRD A G GLY GLY 43 43 H C 5 SEQCRD A I ILE ILE 44 44 C C - SEQCRD A P PRO PRO 45 45 H C 5 SEQCRD A P PRO PRO 46 46 H G 5 SEQCRD A D ASP ASP 47 47 H G 5 SEQCRD A Q GLN GLN 48 48 C G 5 SEQCRD A Q GLN GLN 49 49 E E - SEQCRD A R ARG ARG 50 50 E E - SEQCRD A L LEU LEU 51 51 E E - SEQCRD A I ILE ILE 52 52 E E - SEQCRD A F PHE PHE 53 53 E E - SEQCRD A A ALA ALA 54 54 C T 5 SEQCRD A G GLY GLY 55 55 C T 5 SEQCRD A K LYS LYS 56 56 E E - SEQCRD A Q GLN GLN 57 57 E E - SEQCRD A L LEU LEU 58 58 C C - SEQCRD A E GLU GLU 59 59 C T 5 SEQCRD A D ASP ASP 60 60 C T 5 SEQCRD A G GLY GLY 61 61 C T 5 SEQCRD A R ARG ARG 62 62 C T 5 SEQCRD A T THR THR 63 63 C B 5 SEQCRD A L LEU LEU 64 64 H G 5 SEQCRD A S SER SER 65 65 H G 5 SEQCRD A D ASP ASP 66 66 H G 5 SEQCRD A Y TYR TYR 67 67 H G 5 SEQCRD A N ASN ASN 68 68 H C 5 SEQCRD A I ILE ILE 69 69 C C - SEQCRD A Q GLN GLN 70 70 C T 5 SEQCRD A K LYS LYS 71 71 C T 5 SEQCRD A E GLU GLU 72 72 C T 5 SEQCRD A S SER SER 73 73 C T 5 SEQCRD A T THR THR 74 74 E E - SEQCRD A L LEU LEU 75 75 E E - SEQCRD A H HIS HIS 76 76 E E - SEQCRD A L LEU LEU 77 77 E E - SEQCRD A V VAL VAL 78 78 E E - SEQCRD A L LEU LEU 79 79 E E - SEQCRD A R ARG ARG 80 80 C C - SEQCRD A L LEU LEU 81 81 C C - SEQCRD A R ARG --- 82 - - - 367 SEQCRD A G GLY --- 83 - - - 367 SEQCRD A G GLY --- 84 - - - 367 SEQCRD B M MET MET 1 1 C C - SEQCRD B Q GLN GLN 2 2 E E - SEQCRD B I ILE ILE 3 3 E E - SEQCRD B F PHE PHE 4 4 E E - SEQCRD B V VAL VAL 5 5 E E - SEQCRD B K LYS LYS 6 6 E E - SEQCRD B T THR THR 7 7 E E - SEQCRD B L LEU LEU 8 8 C C - SEQCRD B T THR THR 9 9 C C - SEQCRD B G GLY GLY 10 10 C C - SEQCRD B G GLY GLY 11 11 C T 5 SEQCRD B G GLY GLY 12 12 C T 5 SEQCRD B G GLY GLY 13 13 C T 5 SEQCRD B G GLY GLY 14 14 C T 5 SEQCRD B G GLY GLY 15 15 C T 5 SEQCRD B G GLY GLY 16 16 C T 5 SEQCRD B G GLY GLY 17 17 C T 5 SEQCRD B G GLY GLY 18 18 C C - SEQCRD B K LYS LYS 19 19 C C - SEQCRD B T THR THR 20 20 E E - SEQCRD B I ILE ILE 21 21 E E - SEQCRD B T THR THR 22 22 E E - SEQCRD B L LEU LEU 23 23 E E - SEQCRD B E GLU GLU 24 24 E E - SEQCRD B V VAL VAL 25 25 C C - SEQCRD B E GLU GLU 26 26 C T 5 SEQCRD B P PRO PRO 27 27 C T 5 SEQCRD B S SER SER 28 28 C T 5 SEQCRD B D ASP ASP 29 29 C T 5 SEQCRD B T THR THR 30 30 H B 5 SEQCRD B I ILE ILE 31 31 H H - SEQCRD B E GLU GLU 32 32 H H - SEQCRD B N ASN ASN 33 33 H H - SEQCRD B V VAL VAL 34 34 H H - SEQCRD B K LYS LYS 35 35 H H - SEQCRD B A ALA ALA 36 36 H H - SEQCRD B K LYS LYS 37 37 H H - SEQCRD B I ILE ILE 38 38 H H - SEQCRD B Q GLN GLN 39 39 H H - SEQCRD B D ASP ASP 40 40 H H - SEQCRD B K LYS LYS 41 41 H H - SEQCRD B E GLU GLU 42 42 H H - SEQCRD B G GLY GLY 43 43 H C 5 SEQCRD B I ILE ILE 44 44 C C - SEQCRD B P PRO PRO 45 45 H C 5 SEQCRD B P PRO PRO 46 46 H G 5 SEQCRD B D ASP ASP 47 47 H G 5 SEQCRD B Q GLN GLN 48 48 C G 5 SEQCRD B Q GLN GLN 49 49 E E - SEQCRD B R ARG ARG 50 50 E E - SEQCRD B L LEU LEU 51 51 E E - SEQCRD B I ILE ILE 52 52 E E - SEQCRD B F PHE PHE 53 53 E E - SEQCRD B A ALA ALA 54 54 C T 5 SEQCRD B G GLY GLY 55 55 C T 5 SEQCRD B K LYS LYS 56 56 E E - SEQCRD B Q GLN GLN 57 57 E E - SEQCRD B L LEU LEU 58 58 C C - SEQCRD B E GLU GLU 59 59 C T 5 SEQCRD B D ASP ASP 60 60 C T 5 SEQCRD B G GLY GLY 61 61 C T 5 SEQCRD B R ARG ARG 62 62 C T 5 SEQCRD B T THR THR 63 63 C B 5 SEQCRD B L LEU LEU 64 64 H G 5 SEQCRD B S SER SER 65 65 H G 5 SEQCRD B D ASP ASP 66 66 H G 5 SEQCRD B Y TYR TYR 67 67 H G 5 SEQCRD B N ASN ASN 68 68 H C 5 SEQCRD B I ILE ILE 69 69 C C - SEQCRD B Q GLN GLN 70 70 C T 5 SEQCRD B K LYS LYS 71 71 C T 5 SEQCRD B E GLU GLU 72 72 C T 5 SEQCRD B S SER SER 73 73 C T 5 SEQCRD B T THR THR 74 74 E E - SEQCRD B L LEU LEU 75 75 E E - SEQCRD B H HIS HIS 76 76 E E - SEQCRD B L LEU LEU 77 77 E E - SEQCRD B V VAL VAL 78 78 E E - SEQCRD B L LEU LEU 79 79 E E - SEQCRD B R ARG ARG 80 80 C C - SEQCRD B L LEU LEU 81 81 C C - SEQCRD B R ARG ARG 82 82 C C - SEQCRD B G GLY GLY 83 83 C C - SEQCRD B G GLY GLY 84 84 C C - COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 3 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 63 PDB and STRIDE secondary structures differ S2CERR 6 3 PDB secondary structure is absent S2CERR 7 3 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.350 PARAME R-factor 0.18998 PARAME B-factor 33.353 COMMNT COMMNT Reference database information: DATABA source: DATABA UNP: UBIQ_HUMAN (P62988) COMMNT DATABA mutation: DATABA GLY A 15 --> ? ? INSERTION DATABA GLY B 13 --> ? ? INSERTION DATABA GLY B 16 --> ? ? INSERTION DATABA GLY A 17 --> ? ? INSERTION DATABA GLY B 10 --> ? ? INSERTION DATABA GLY A 13 --> ? ? INSERTION DATABA GLY B 15 --> ? ? INSERTION DATABA GLY A 11 --> ? ? INSERTION DATABA GLY B 17 --> ? ? INSERTION DATABA GLY A 16 --> ? ? INSERTION DATABA GLY A 14 --> ? ? INSERTION DATABA GLY A 10 --> ? ? INSERTION DATABA GLY A 12 --> ? ? INSERTION DATABA GLY B 14 --> ? ? INSERTION DATABA GLY B 12 --> ? ? INSERTION DATABA GLY B 11 --> ? ? INSERTION