HEADSC 2or8 COMMNT S2C correlation file created: Sat Dec 15 12:50:56 EST 2007 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD B M MET MET 1 1 C C - SEQCRD B D ASP ASP 2 2 C C - SEQCRD B S SER SER 3 3 C C - SEQCRD B Y TYR TYR 4 4 C C - SEQCRD B V VAL VAL 5 5 E E - SEQCRD B E GLU GLU 6 6 E E - SEQCRD B V VAL VAL 7 7 E E - SEQCRD B K LYS LYS 8 8 E E - SEQCRD B G GLY GLY 9 9 E E - SEQCRD B V VAL VAL 10 10 E E - SEQCRD B V VAL VAL 11 11 C T 5 SEQCRD B G GLY GLY 12 12 C T 5 SEQCRD B H HIS HIS 13 13 C b 5 SEQCRD B P PRO PRO 14 14 C C - SEQCRD B V VAL VAL 15 15 E E - SEQCRD B T THR THR 16 16 E E - SEQCRD B L LEU LEU 17 17 E E - SEQCRD B P PRO PRO 18 18 C C - SEQCRD B C CYS CYS 19 19 C C - SEQCRD B T THR THR 20 20 C B 5 SEQCRD B Y TYR TYR 21 21 C C - SEQCRD B S SER SER 22 22 C C - SEQCRD B T THR THR 23 23 C T 5 SEQCRD B Y TYR TYR 24 24 C T 5 SEQCRD B R ARG ARG 25 25 C T 5 SEQCRD B G GLY GLY 26 26 C T 5 SEQCRD B I ILE ILE 27 27 C C - SEQCRD B T THR THR 28 28 C C - SEQCRD B T THR THR 29 29 E E - SEQCRD B T THR THR 30 30 E E - SEQCRD B C CYS CYS 31 31 E E - SEQCRD B W TRP TRP 32 32 E E - SEQCRD B G GLY GLY 33 33 E E - SEQCRD B R ARG ARG 34 34 E E - SEQCRD B G GLY GLY 35 35 C C - SEQCRD B Q GLN GLN 36 36 C C - SEQCRD B C CYS CYS 37 37 C C - SEQCRD B P PRO PRO 38 38 C T 5 SEQCRD B S SER SER 39 39 C T 5 SEQCRD B S SER SER 40 40 C T 5 SEQCRD B A ALA ALA 41 41 C T 5 SEQCRD B C CYS CYS 42 42 C T 5 SEQCRD B Q GLN GLN 43 43 C T 5 SEQCRD B N ASN ASN 44 44 C T 5 SEQCRD B T THR THR 45 45 E E - SEQCRD B L LEU LEU 46 46 E E - SEQCRD B I ILE ILE 47 47 E E - SEQCRD B W TRP TRP 48 48 E E - SEQCRD B T THR THR 49 49 E E - SEQCRD B N ASN ASN 50 50 C T 5 SEQCRD B G GLY GLY 51 51 C T 5 SEQCRD B H HIS HIS 52 52 C T 5 SEQCRD B R ARG ARG 53 53 C T 5 SEQCRD B V VAL VAL 54 54 E E - SEQCRD B T THR THR 55 55 E E - SEQCRD B Y TYR TYR 56 56 E E - SEQCRD B Q GLN GLN 57 57 E E - SEQCRD B K LYS LYS 58 58 C T 5 SEQCRD B S SER SER 59 59 C T 5 SEQCRD B S SER SER 60 60 C T 5 SEQCRD B R ARG ARG 61 61 C T 5 SEQCRD B Y TYR TYR 62 62 E E - SEQCRD B N ASN ASN 63 63 E E - SEQCRD B L LEU LEU 64 64 C E 5 SEQCRD B K LYS LYS 65 65 C C - SEQCRD B G GLY GLY 66 66 C C - SEQCRD B H HIS HIS 67 67 H C 5 SEQCRD B I ILE ILE 68 68 H G 5 SEQCRD B S SER SER 69 69 H G 5 SEQCRD B E GLU GLU 70 70 H G 5 SEQCRD B G GLY GLY 71 71 H C 5 SEQCRD B D ASP ASP 72 72 C B 5 SEQCRD B V VAL VAL 73 73 C C - SEQCRD B S SER SER 74 74 C C - SEQCRD B L LEU LEU 75 75 E E - SEQCRD B T THR THR 76 76 E E - SEQCRD B I ILE ILE 77 77 E E - SEQCRD B E GLU GLU 78 78 C T 5 SEQCRD B N ASN ASN 79 79 C T 5 SEQCRD B S SER SER 80 80 C b 5 SEQCRD B V VAL VAL 81 81 H C 5 SEQCRD B E GLU GLU 82 82 H G 5 SEQCRD B S SER SER 83 83 H G 5 SEQCRD B D ASP ASP 84 84 H G 5 SEQCRD B S SER SER 85 85 H C 5 SEQCRD B G GLY GLY 86 86 E E - SEQCRD B L LEU LEU 87 87 E E - SEQCRD B Y TYR TYR 88 88 E E - SEQCRD B C CYS CYS 89 89 E E - SEQCRD B C CYS CYS 90 90 E E - SEQCRD B R ARG ARG 91 91 E E - SEQCRD B V VAL VAL 92 92 E E - SEQCRD B E GLU GLU 93 93 E E - SEQCRD B I ILE ILE 94 94 C T 5 SEQCRD B P PRO PRO 95 95 C C - SEQCRD B G GLY GLY 96 96 C T 5 SEQCRD B W TRP TRP 97 97 C T 5 SEQCRD B F PHE PHE 98 98 C T 5 SEQCRD B N ASN ASN 99 99 C T 5 SEQCRD B D ASP ASP 100 100 C C - SEQCRD B Q GLN GLN 101 101 E E - SEQCRD B K LYS LYS 102 102 E E - SEQCRD B V VAL VAL 103 103 E E - SEQCRD B T THR THR 104 104 E E - SEQCRD B F PHE PHE 105 105 E E - SEQCRD B S SER SER 106 106 E E - SEQCRD B L LEU LEU 107 107 E E - SEQCRD B Q GLN GLN 108 108 E E - SEQCRD B V VAL VAL 109 109 E E - SEQCRD B K LYS LYS 110 110 E E - SEQCRD B P PRO PRO 111 111 C T 5 SEQCRD B E GLU GLU 112 112 C T 5 SEQCRD B L LEU LEU 113 113 C T 5 SEQCRD B V VAL VAL 114 114 C T 5 SEQCRD B P PRO PRO 115 115 C C - SEQCRD B R ARG ARG 116 116 C C - SEQCRD A M MET MET 1 1 C C - SEQCRD A D ASP ASP 2 2 C C - SEQCRD A S SER SER 3 3 C C - SEQCRD A Y TYR TYR 4 4 C C - SEQCRD A V VAL VAL 5 5 E E - SEQCRD A E GLU GLU 6 6 E E - SEQCRD A V VAL VAL 7 7 E E - SEQCRD A K LYS LYS 8 8 E E - SEQCRD A G GLY GLY 9 9 E E - SEQCRD A V VAL VAL 10 10 E E - SEQCRD A V VAL VAL 11 11 C T 5 SEQCRD A G GLY GLY 12 12 C T 5 SEQCRD A H HIS HIS 13 13 C b 5 SEQCRD A P PRO PRO 14 14 C C - SEQCRD A V VAL VAL 15 15 E E - SEQCRD A T THR THR 16 16 E E - SEQCRD A L LEU LEU 17 17 E E - SEQCRD A P PRO PRO 18 18 C C - SEQCRD A C CYS CYS 19 19 C C - SEQCRD A T THR THR 20 20 C B 5 SEQCRD A Y TYR TYR 21 21 C C - SEQCRD A S SER SER 22 22 C C - SEQCRD A T THR THR 23 23 C T 5 SEQCRD A Y TYR TYR 24 24 C T 5 SEQCRD A R ARG ARG 25 25 C T 5 SEQCRD A G GLY GLY 26 26 C T 5 SEQCRD A I ILE ILE 27 27 C C - SEQCRD A T THR THR 28 28 C C - SEQCRD A T THR THR 29 29 C C - SEQCRD A T THR THR 30 30 E E - SEQCRD A C CYS CYS 31 31 E E - SEQCRD A W TRP TRP 32 32 E E - SEQCRD A G GLY GLY 33 33 E E - SEQCRD A R ARG ARG 34 34 E E - SEQCRD A G GLY GLY 35 35 C C - SEQCRD A Q GLN GLN 36 36 C C - SEQCRD A C CYS CYS 37 37 C C - SEQCRD A P PRO PRO 38 38 C C - SEQCRD A S SER SER 39 39 C C - SEQCRD A S SER SER 40 40 C C - SEQCRD A A ALA ALA 41 41 C C - SEQCRD A C CYS CYS 42 42 C T 5 SEQCRD A Q GLN GLN 43 43 C T 5 SEQCRD A N ASN ASN 44 44 C T 5 SEQCRD A T THR THR 45 45 E E - SEQCRD A L LEU LEU 46 46 E E - SEQCRD A I ILE ILE 47 47 E E - SEQCRD A W TRP TRP 48 48 E E - SEQCRD A T THR THR 49 49 E E - SEQCRD A N ASN ASN 50 50 C T 5 SEQCRD A G GLY GLY 51 51 C T 5 SEQCRD A H HIS HIS 52 52 C T 5 SEQCRD A R ARG ARG 53 53 C T 5 SEQCRD A V VAL VAL 54 54 E E - SEQCRD A T THR THR 55 55 E E - SEQCRD A Y TYR TYR 56 56 E E - SEQCRD A Q GLN GLN 57 57 E E - SEQCRD A K LYS LYS 58 58 C T 5 SEQCRD A S SER SER 59 59 C T 5 SEQCRD A S SER SER 60 60 C T 5 SEQCRD A R ARG ARG 61 61 C T 5 SEQCRD A Y TYR TYR 62 62 E E - SEQCRD A N ASN ASN 63 63 E E - SEQCRD A L LEU LEU 64 64 C E 5 SEQCRD A K LYS LYS 65 65 C C - SEQCRD A G GLY GLY 66 66 C C - SEQCRD A H HIS HIS 67 67 H C 5 SEQCRD A I ILE ILE 68 68 H G 5 SEQCRD A S SER SER 69 69 H G 5 SEQCRD A E GLU GLU 70 70 H G 5 SEQCRD A G GLY GLY 71 71 H C 5 SEQCRD A D ASP ASP 72 72 C B 5 SEQCRD A V VAL VAL 73 73 C C - SEQCRD A S SER SER 74 74 C C - SEQCRD A L LEU LEU 75 75 E E - SEQCRD A T THR THR 76 76 E E - SEQCRD A I ILE ILE 77 77 E E - SEQCRD A E GLU GLU 78 78 C T 5 SEQCRD A N ASN ASN 79 79 C T 5 SEQCRD A S SER SER 80 80 C b 5 SEQCRD A V VAL VAL 81 81 H C 5 SEQCRD A E GLU GLU 82 82 H G 5 SEQCRD A S SER SER 83 83 H G 5 SEQCRD A D ASP ASP 84 84 H G 5 SEQCRD A S SER SER 85 85 H C 5 SEQCRD A G GLY GLY 86 86 E E - SEQCRD A L LEU LEU 87 87 E E - SEQCRD A Y TYR TYR 88 88 E E - SEQCRD A C CYS CYS 89 89 E E - SEQCRD A C CYS CYS 90 90 E E - SEQCRD A R ARG ARG 91 91 E E - SEQCRD A V VAL VAL 92 92 E E - SEQCRD A E GLU GLU 93 93 C C - SEQCRD A I ILE ILE 94 94 C C - SEQCRD A P PRO PRO 95 95 C C - SEQCRD A G GLY GLY 96 96 C T 5 SEQCRD A W TRP TRP 97 97 C T 5 SEQCRD A F PHE PHE 98 98 C T 5 SEQCRD A N ASN ASN 99 99 C T 5 SEQCRD A D ASP ASP 100 100 C C - SEQCRD A Q GLN GLN 101 101 E E - SEQCRD A K LYS LYS 102 102 E E - SEQCRD A V VAL VAL 103 103 E E - SEQCRD A T THR THR 104 104 E E - SEQCRD A F PHE PHE 105 105 E E - SEQCRD A S SER SER 106 106 E E - SEQCRD A L LEU LEU 107 107 E E - SEQCRD A Q GLN GLN 108 108 E E - SEQCRD A V VAL VAL 109 109 E E - SEQCRD A K LYS LYS 110 110 E E - SEQCRD A P PRO PRO 111 111 C T 5 SEQCRD A E GLU GLU 112 112 C T 5 SEQCRD A L LEU LEU 113 113 C T 5 SEQCRD A V VAL VAL 114 114 C T 5 SEQCRD A P PRO PRO 115 115 C C - SEQCRD A R ARG ARG 116 116 C C - COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 0 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 89 PDB and STRIDE secondary structures differ S2CERR 6 0 PDB secondary structure is absent S2CERR 7 0 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.5 PARAME R-factor 0.241 PARAME B-factor 24.4 COMMNT COMMNT Reference database information: DATABA source: DATABA UNP: TIMD1_MOUSE (Q5QNS5) COMMNT DATABA mutation: DATABA ARG A 116 --> ? ? 'CLONING ARTIFACT' DATABA MET B 1 --> ? ? 'INITIATING METHIONINE' DATABA VAL B 114 --> ? ? 'CLONING ARTIFACT' DATABA PRO B 115 --> ? ? 'CLONING ARTIFACT' DATABA LEU B 113 --> ? ? 'CLONING ARTIFACT' DATABA LEU A 113 --> ? ? 'CLONING ARTIFACT' DATABA VAL A 114 --> ? ? 'CLONING ARTIFACT' DATABA ARG B 116 --> ? ? 'CLONING ARTIFACT' DATABA PRO A 115 --> ? ? 'CLONING ARTIFACT' DATABA MET A 1 --> ? ? 'INITIATING METHIONINE'