HEADSC 2vty COMMNT S2C correlation file created: Sat Dec 17 14:45:00 EST 2011 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD A M MET --- 1 - - - 367 SEQCRD A G GLY --- 2 - - - 367 SEQCRD A S SER --- 3 - - - 367 SEQCRD A H HIS --- 4 - - - 367 SEQCRD A H HIS --- 5 - - - 367 SEQCRD A H HIS --- 6 - - - 367 SEQCRD A H HIS --- 7 - - - 367 SEQCRD A H HIS --- 8 - - - 367 SEQCRD A H HIS --- 9 - - - 367 SEQCRD A S SER --- 10 - - - 367 SEQCRD A Q GLN --- 11 - - - 367 SEQCRD A D ASP --- 12 - - - 367 SEQCRD A P PRO --- 13 - - - 367 SEQCRD A V VAL --- 14 - - - 367 SEQCRD A Q GLN --- 15 - - - 367 SEQCRD A D ASP --- 16 - - - 367 SEQCRD A I ILE --- 17 - - - 367 SEQCRD A E GLU --- 18 - - - 367 SEQCRD A D ASP --- 19 - - - 367 SEQCRD A E GLU --- 20 - - - 367 SEQCRD A A ALA --- 21 - - - 367 SEQCRD A S SER --- 22 - - - 367 SEQCRD A N ASN --- 23 - - - 367 SEQCRD A N ASN --- 24 - - - 367 SEQCRD A V VAL --- 25 - - - 367 SEQCRD A D ASP --- 26 - - - 367 SEQCRD A H HIS --- 27 - - - 367 SEQCRD A D ASP --- 28 - - - 367 SEQCRD A Y TYR --- 29 - - - 367 SEQCRD A V VAL VAL 30 34 C T 45 SEQCRD A Y TYR TYR 31 35 C T 45 SEQCRD A P PRO PRO 32 36 C T 45 SEQCRD A L LEU LEU 33 37 C T 45 SEQCRD A P PRO PRO 34 38 H T 45 SEQCRD A E GLU GLU 35 39 H H 4 SEQCRD A N ASN ASN 36 40 H H 4 SEQCRD A M MET MET 37 41 H H 4 SEQCRD A V VAL VAL 38 42 H H 4 SEQCRD A Y TYR TYR 39 43 H H 4 SEQCRD A R ARG ARG 40 44 H H 4 SEQCRD A F PHE PHE 41 45 H H 4 SEQCRD A D ASP ASP 42 46 H H 4 SEQCRD A K LYS LYS 43 47 H H 4 SEQCRD A S SER SER 44 48 H H 4 SEQCRD A T THR THR 45 49 H H 4 SEQCRD A N ASN ASN 46 50 H G 45 SEQCRD A I ILE ILE 47 51 H G 45 SEQCRD A L LEU LEU 48 52 H G 45 SEQCRD A D ASP ASP 49 53 H G 45 SEQCRD A Y TYR TYR 50 54 H G 45 SEQCRD A L LEU LEU 51 55 H C 45 SEQCRD A S SER SER 52 56 C C 4 SEQCRD A T THR THR 53 57 H C 45 SEQCRD A E GLU GLU 54 58 H H 4 SEQCRD A R ARG ARG 55 59 H H 4 SEQCRD A D ASP ASP 56 60 H H 4 SEQCRD A H HIS HIS 57 61 H H 4 SEQCRD A V VAL VAL 58 62 H H 4 SEQCRD A M MET MET 59 63 H H 4 SEQCRD A M MET MET 60 64 H H 4 SEQCRD A A ALA ALA 61 65 H H 4 SEQCRD A V VAL VAL 62 66 H H 4 SEQCRD A R ARG ARG 63 67 H H 4 SEQCRD A Y TYR TYR 64 68 H H 4 SEQCRD A Y TYR TYR 65 69 H H 4 SEQCRD A M MET MET 66 70 H H 4 SEQCRD A S SER SER 67 71 H H 4 SEQCRD A K LYS LYS 68 72 H H 4 SEQCRD A Q GLN GLN 69 73 H H 4 SEQCRD A R ARG ARG 70 74 H H 4 SEQCRD A L LEU LEU 71 75 H H 4 SEQCRD A D ASP ASP 72 76 H H 4 SEQCRD A D ASP ASP 73 77 H H 4 SEQCRD A L LEU LEU 74 78 H H 4 SEQCRD A Y TYR TYR 75 79 H H 4 SEQCRD A R ARG ARG 76 80 H H 4 SEQCRD A Q GLN GLN 77 81 H C 45 SEQCRD A L LEU LEU 78 82 H C 45 SEQCRD A P PRO PRO 79 83 H C 45 SEQCRD A T THR THR 80 84 H H 4 SEQCRD A K LYS LYS 81 85 H H 4 SEQCRD A T THR THR 82 86 H H 4 SEQCRD A R ARG ARG 83 87 H H 4 SEQCRD A S SER SER 84 88 H H 4 SEQCRD A Y TYR TYR 85 89 H H 4 SEQCRD A I ILE ILE 86 90 H H 4 SEQCRD A D ASP ASP 87 91 H H 4 SEQCRD A I ILE ILE 88 92 H H 4 SEQCRD A I ILE ILE 89 93 H H 4 SEQCRD A N ASN ASN 90 94 H H 4 SEQCRD A I ILE ILE 91 95 H H 4 SEQCRD A Y TYR TYR 92 96 H H 4 SEQCRD A C CYS CYS 93 97 H H 4 SEQCRD A D ASP ASP 94 98 H H 4 SEQCRD A K LYS LYS 95 99 H H 4 SEQCRD A V VAL VAL 96 100 H H 4 SEQCRD A S SER SER 97 101 H H 4 SEQCRD A N ASN ASN 98 102 H H 4 SEQCRD A D ASP ASP 99 103 H H 4 SEQCRD A Y TYR TYR 100 104 H H 4 SEQCRD A N ASN --- 101 - - - 367 SEQCRD A R ARG --- 102 - - - 367 SEQCRD A D ASP --- 103 - - - 367 SEQCRD A M MET --- 104 - - - 367 SEQCRD A N ASN --- 105 - - - 367 SEQCRD A I ILE --- 106 - - - 367 SEQCRD A M MET --- 107 - - - 367 SEQCRD A Y TYR --- 108 - - - 367 SEQCRD A D ASP --- 109 - - - 367 SEQCRD A M MET MET 110 114 C T 45 SEQCRD A A ALA ALA 111 115 C T 45 SEQCRD A S SER SER 112 116 C T 45 SEQCRD A T THR THR 113 117 C T 45 SEQCRD A K LYS LYS 114 118 C T 45 SEQCRD A S SER SER 115 119 C T 45 SEQCRD A F PHE PHE 116 120 C T 45 SEQCRD A T THR THR 117 121 H C 45 SEQCRD A V VAL VAL 118 122 H H 4 SEQCRD A Y TYR TYR 119 123 H H 4 SEQCRD A D ASP ASP 120 124 H H 4 SEQCRD A I ILE ILE 121 125 H H 4 SEQCRD A N ASN ASN 122 126 H H 4 SEQCRD A N ASN ASN 123 127 H H 4 SEQCRD A E GLU GLU 124 128 H H 4 SEQCRD A V VAL VAL 125 129 H H 4 SEQCRD A N ASN ASN 126 130 H H 4 SEQCRD A T THR THR 127 131 H H 4 SEQCRD A I ILE ILE 128 132 H H 4 SEQCRD A M MET MET 129 133 H H 4 SEQCRD A L LEU LEU 130 134 H H 4 SEQCRD A D ASP ASP 131 135 H H 4 SEQCRD A N ASN ASN 132 136 H C 45 SEQCRD A K LYS LYS 133 137 C C 4 SEQCRD A G GLY GLY 134 138 H C 45 SEQCRD A L LEU LEU 135 139 H H 4 SEQCRD A G GLY GLY 136 140 H H 4 SEQCRD A V VAL VAL 137 141 H H 4 SEQCRD A R ARG ARG 138 142 H H 4 SEQCRD A L LEU LEU 139 143 H H 4 SEQCRD A A ALA ALA 140 144 H H 4 SEQCRD A T THR THR 141 145 H H 4 SEQCRD A I ILE ILE 142 146 H H 4 SEQCRD A S SER SER 143 147 H H 4 SEQCRD A F PHE PHE 144 148 H H 4 SEQCRD A I ILE ILE 145 149 H H 4 SEQCRD A T THR THR 146 150 H H 4 SEQCRD A E GLU GLU 147 151 H H 4 SEQCRD A L LEU LEU 148 152 H H 4 SEQCRD A G GLY GLY 149 153 H H 4 SEQCRD A R ARG ARG 150 154 H H 4 SEQCRD A R ARG ARG 151 155 H H 4 SEQCRD A C CYS CYS 152 156 H C 45 SEQCRD A M MET MET 153 157 C C 4 SEQCRD A N ASN ASN 154 158 H C 45 SEQCRD A P PRO PRO 155 159 H H 4 SEQCRD A V VAL VAL 156 160 H H 4 SEQCRD A K LYS LYS 157 161 H H 4 SEQCRD A T THR THR 158 162 H H 4 SEQCRD A I ILE ILE 159 163 H H 4 SEQCRD A K LYS LYS 160 164 H H 4 SEQCRD A M MET MET 161 165 H H 4 SEQCRD A F PHE PHE 162 166 H H 4 SEQCRD A T THR THR 163 167 H H 4 SEQCRD A L LEU LEU 164 168 H H 4 SEQCRD A L LEU LEU 165 169 H H 4 SEQCRD A S SER SER 166 170 H H 4 SEQCRD A H HIS HIS 167 171 H H 4 SEQCRD A T THR THR 168 172 H H 4 SEQCRD A I ILE ILE 169 173 H H 4 SEQCRD A C CYS CYS 170 174 H T 45 SEQCRD A D ASP ASP 171 175 H T 45 SEQCRD A D ASP ASP 172 176 H H 4 SEQCRD A C CYS CYS 173 177 H H 4 SEQCRD A F PHE PHE 174 178 H H 4 SEQCRD A V VAL VAL 175 179 H H 4 SEQCRD A D ASP ASP 176 180 H H 4 SEQCRD A Y TYR TYR 177 181 H H 4 SEQCRD A I ILE ILE 178 182 H H 4 SEQCRD A T THR THR 179 183 H H 4 SEQCRD A D ASP ASP 180 184 H H 4 SEQCRD A I ILE ILE 181 185 H H 4 SEQCRD A S SER SER 182 186 H C 45 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 38 No ATOM record S2CERR 4 144 SEQRES and ATOM residue numbers differ S2CERR 5 30 PDB and STRIDE secondary structures differ S2CERR 6 38 PDB secondary structure is absent S2CERR 7 38 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.10 PARAME R-factor 0.193 PARAME B-factor 28.971 COMMNT COMMNT Reference database information: DATABA source: DATABA PDB: 2VTY (2VTY) DATABA UNP: VF01_VACCA (O57173) COMMNT DATABA mutation: DATABA LEU A 130 --> MET 134 CONFLICT DATABA MET A 129 --> LEU 133 CONFLICT