HEADSC 3dba COMMNT S2C correlation file created: Fri Jul 4 20:24:31 EDT 2008 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD B M MET --- 1 - - - 367 SEQCRD B R ARG ARG 2 55 C C 4 SEQCRD B L LEU LEU 3 56 C C 4 SEQCRD B E GLU GLU 4 57 H H 4 SEQCRD B E GLU GLU 5 58 H H 4 SEQCRD B C CYS CYS 6 59 H H 4 SEQCRD B N ASN ASN 7 60 H H 4 SEQCRD B I ILE ILE 8 61 H H 4 SEQCRD B L LEU LEU 9 62 H H 4 SEQCRD B F PHE PHE 10 63 H H 4 SEQCRD B E GLU GLU 11 64 H H 4 SEQCRD B L LEU LEU 12 65 H H 4 SEQCRD B L LEU LEU 13 66 H H 4 SEQCRD B T THR THR 14 67 H H 4 SEQCRD B E GLU GLU 15 68 H H 4 SEQCRD B I ILE ILE 16 69 H C 45 SEQCRD B Q GLN GLN 17 70 C C 4 SEQCRD B D ASP ASP 18 71 C C 4 SEQCRD B E GLU GLU 19 72 C T 45 SEQCRD B A ALA ALA 20 73 C T 45 SEQCRD B G GLY GLY 21 74 C T 45 SEQCRD B S SER SER 22 75 C T 45 SEQCRD B M MET MET 23 76 H H 4 SEQCRD B E GLU GLU 24 77 H H 4 SEQCRD B K LYS LYS 25 78 H H 4 SEQCRD B I ILE ILE 26 79 H H 4 SEQCRD B V VAL VAL 27 80 H H 4 SEQCRD B H HIS HIS 28 81 H H 4 SEQCRD B K LYS LYS 29 82 H H 4 SEQCRD B T THR THR 30 83 H H 4 SEQCRD B L LEU LEU 31 84 H H 4 SEQCRD B Q GLN GLN 32 85 H H 4 SEQCRD B R ARG ARG 33 86 H H 4 SEQCRD B L LEU LEU 34 87 H H 4 SEQCRD B S SER SER 35 88 H H 4 SEQCRD B Q GLN GLN 36 89 H H 4 SEQCRD B L LEU LEU 37 90 H H 4 SEQCRD B L LEU LEU 38 91 H H 4 SEQCRD B A ALA ALA 39 92 H C 45 SEQCRD B A ALA ALA 40 93 C E 45 SEQCRD B D ASP ASP 41 94 C E 45 SEQCRD B R ARG ARG 42 95 C E 45 SEQCRD B C CYS CYS 43 96 C E 45 SEQCRD B S SER SER 44 97 C E 45 SEQCRD B M MET MET 45 98 C E 45 SEQCRD B F PHE PHE 46 99 C E 45 SEQCRD B I ILE ILE 47 100 C E 45 SEQCRD B C CYS CYS 48 101 C E 45 SEQCRD B R ARG ARG 49 102 C E 45 SEQCRD B S SER SER 50 103 C E 45 SEQCRD B R ARG ARG 51 104 C T 45 SEQCRD B N ASN ASN 52 105 C T 45 SEQCRD B G GLY GLY 53 106 C T 45 SEQCRD B I ILE ILE 54 107 C T 45 SEQCRD B P PRO PRO 55 108 E E 4 SEQCRD B E GLU GLU 56 109 E E 4 SEQCRD B V VAL VAL 57 110 E E 4 SEQCRD B A ALA ALA 58 111 E E 4 SEQCRD B T THR THR 59 112 E E 4 SEQCRD B R ARG ARG 60 113 E E 4 SEQCRD B L LEU LEU 61 114 E E 4 SEQCRD B L LEU LEU 62 115 E E 4 SEQCRD B N ASN ASN 63 116 E E 4 SEQCRD B V VAL VAL 64 117 E E 4 SEQCRD B T THR THR 65 118 C T 45 SEQCRD B P PRO PRO 66 119 C T 45 SEQCRD B T THR THR 67 120 C T 45 SEQCRD B S SER SER 68 121 C T 45 SEQCRD B K LYS LYS 69 122 H C 45 SEQCRD B F PHE PHE 70 123 H G 45 SEQCRD B E GLU GLU 71 124 H G 45 SEQCRD B D ASP ASP 72 125 H G 45 SEQCRD B N ASN ASN 73 126 H C 45 SEQCRD B L LEU LEU 74 127 H B 45 SEQCRD B V VAL VAL 75 128 C C 4 SEQCRD B N ASN ASN 76 129 H T 45 SEQCRD B P PRO PRO 77 130 H T 45 SEQCRD B D ASP ASP 78 131 H T 45 SEQCRD B K LYS LYS 79 132 H T 45 SEQCRD B E GLU GLU 80 133 H T 45 SEQCRD B T THR THR 81 134 C C 4 SEQCRD B V VAL VAL 82 135 E E 4 SEQCRD B F PHE PHE 83 136 E E 4 SEQCRD B P PRO PRO 84 137 E E 4 SEQCRD B L LEU LEU 85 138 C T 45 SEQCRD B D ASP ASP 86 139 C T 45 SEQCRD B I ILE ILE 87 140 C T 45 SEQCRD B G GLY GLY 88 141 H T 45 SEQCRD B I ILE ILE 89 142 H H 4 SEQCRD B A ALA ALA 90 143 H H 4 SEQCRD B G GLY GLY 91 144 H H 4 SEQCRD B W TRP TRP 92 145 H H 4 SEQCRD B V VAL VAL 93 146 H H 4 SEQCRD B A ALA ALA 94 147 H H 4 SEQCRD B H HIS HIS 95 148 H H 4 SEQCRD B T THR THR 96 149 H H 4 SEQCRD B K LYS LYS 97 150 H C 45 SEQCRD B K LYS LYS 98 151 C C 4 SEQCRD B F PHE PHE 99 152 C C 4 SEQCRD B F PHE PHE 100 153 E E 4 SEQCRD B N ASN ASN 101 154 E E 4 SEQCRD B I ILE ILE 102 155 E E 4 SEQCRD B P PRO PRO 103 156 C T 45 SEQCRD B D ASP ASP 104 157 C T 45 SEQCRD B V VAL VAL 105 158 C T 45 SEQCRD B K LYS LYS 106 159 C T 45 SEQCRD B K LYS LYS 107 160 C T 45 SEQCRD B N ASN ASN 108 161 C T 45 SEQCRD B N ASN ASN 109 162 C T 45 SEQCRD B H HIS HIS 110 163 C T 45 SEQCRD B F PHE PHE 111 164 C T 45 SEQCRD B S SER SER 112 165 C C 4 SEQCRD B D ASP ASP 113 166 H C 45 SEQCRD B Y TYR TYR 114 167 H H 4 SEQCRD B L LEU LEU 115 168 H H 4 SEQCRD B D ASP ASP 116 169 H H 4 SEQCRD B K LYS LYS 117 170 H H 4 SEQCRD B K LYS LYS 118 171 H H 4 SEQCRD B T THR THR 119 172 H H 4 SEQCRD B G GLY GLY 120 173 H C 45 SEQCRD B Y TYR TYR 121 174 C C 4 SEQCRD B T THR THR 122 175 C C 4 SEQCRD B T THR THR 123 176 C C 4 SEQCRD B V VAL VAL 124 177 C C 4 SEQCRD B N ASN ASN 125 178 C C 4 SEQCRD B M MET MET 126 179 E E 4 SEQCRD B M MET MET 127 180 E E 4 SEQCRD B A ALA ALA 128 181 E E 4 SEQCRD B I ILE ILE 129 182 E E 4 SEQCRD B P PRO PRO 130 183 E E 4 SEQCRD B I ILE ILE 131 184 E E 4 SEQCRD B T THR THR 132 185 E E 4 SEQCRD B Q GLN GLN 133 186 E E 4 SEQCRD B G GLY GLY 134 187 C T 45 SEQCRD B K LYS LYS 135 188 C T 45 SEQCRD B E GLU GLU 136 189 E E 4 SEQCRD B V VAL VAL 137 190 E E 4 SEQCRD B L LEU LEU 138 191 E E 4 SEQCRD B A ALA ALA 139 192 E E 4 SEQCRD B V VAL VAL 140 193 E E 4 SEQCRD B V VAL VAL 141 194 E E 4 SEQCRD B M MET MET 142 195 E E 4 SEQCRD B A ALA ALA 143 196 E E 4 SEQCRD B L LEU LEU 144 197 E E 4 SEQCRD B N ASN ASN 145 198 E E 4 SEQCRD B K LYS LYS 146 199 E E 4 SEQCRD B L LEU LEU 147 200 C T 45 SEQCRD B N ASN ASN 148 201 C T 45 SEQCRD B A ALA ALA 149 202 C T 45 SEQCRD B S SER SER 150 203 C C 4 SEQCRD B E GLU GLU 151 204 C C 4 SEQCRD B F PHE PHE 152 205 C C 4 SEQCRD B S SER SER 153 206 H C 45 SEQCRD B K LYS LYS 154 207 H H 4 SEQCRD B E GLU GLU 155 208 H H 4 SEQCRD B D ASP ASP 156 209 H H 4 SEQCRD B E GLU GLU 157 210 H H 4 SEQCRD B E GLU GLU 158 211 H H 4 SEQCRD B V VAL VAL 159 212 H H 4 SEQCRD B F PHE PHE 160 213 H H 4 SEQCRD B K LYS LYS 161 214 H H 4 SEQCRD B K LYS LYS 162 215 H H 4 SEQCRD B Y TYR TYR 163 216 H H 4 SEQCRD B L LEU LEU 164 217 H H 4 SEQCRD B N ASN ASN 165 218 H H 4 SEQCRD B F PHE PHE 166 219 H H 4 SEQCRD B I ILE ILE 167 220 H H 4 SEQCRD B S SER SER 168 221 H H 4 SEQCRD B L LEU LEU 169 222 H H 4 SEQCRD B V VAL VAL 170 223 H H 4 SEQCRD B L LEU LEU 171 224 H H 4 SEQCRD B R ARG ARG 172 225 C C 4 SEQCRD B L LEU --- 173 - - - 367 SEQCRD B E GLU --- 174 - - - 367 SEQCRD B H HIS --- 175 - - - 367 SEQCRD B H HIS --- 176 - - - 367 SEQCRD B H HIS --- 177 - - - 367 SEQCRD B H HIS --- 178 - - - 367 SEQCRD B H HIS --- 179 - - - 367 SEQCRD B H HIS --- 180 - - - 367 SEQCRD A M MET --- 1 - - - 367 SEQCRD A R ARG ARG 2 55 H C 45 SEQCRD A L LEU LEU 3 56 H H 4 SEQCRD A E GLU GLU 4 57 H H 4 SEQCRD A E GLU GLU 5 58 H H 4 SEQCRD A C CYS CYS 6 59 H H 4 SEQCRD A N ASN ASN 7 60 H H 4 SEQCRD A I ILE ILE 8 61 H H 4 SEQCRD A L LEU LEU 9 62 H H 4 SEQCRD A F PHE PHE 10 63 H H 4 SEQCRD A E GLU GLU 11 64 H H 4 SEQCRD A L LEU LEU 12 65 H H 4 SEQCRD A L LEU LEU 13 66 H H 4 SEQCRD A T THR THR 14 67 H H 4 SEQCRD A E GLU GLU 15 68 C C 4 SEQCRD A I ILE ILE 16 69 C C 4 SEQCRD A Q GLN GLN 17 70 C T 45 SEQCRD A D ASP ASP 18 71 C T 45 SEQCRD A E GLU GLU 19 72 C T 45 SEQCRD A A ALA ALA 20 73 C T 45 SEQCRD A G GLY GLY 21 74 H T 45 SEQCRD A S SER SER 22 75 H H 4 SEQCRD A M MET MET 23 76 H H 4 SEQCRD A E GLU GLU 24 77 H H 4 SEQCRD A K LYS LYS 25 78 H H 4 SEQCRD A I ILE ILE 26 79 H H 4 SEQCRD A V VAL VAL 27 80 H H 4 SEQCRD A H HIS HIS 28 81 H H 4 SEQCRD A K LYS LYS 29 82 H H 4 SEQCRD A T THR THR 30 83 H H 4 SEQCRD A L LEU LEU 31 84 H H 4 SEQCRD A Q GLN GLN 32 85 H H 4 SEQCRD A R ARG ARG 33 86 H H 4 SEQCRD A L LEU LEU 34 87 H H 4 SEQCRD A S SER SER 35 88 H H 4 SEQCRD A Q GLN GLN 36 89 H H 4 SEQCRD A L LEU LEU 37 90 H H 4 SEQCRD A L LEU LEU 38 91 H H 4 SEQCRD A A ALA ALA 39 92 H C 45 SEQCRD A A ALA ALA 40 93 C E 45 SEQCRD A D ASP ASP 41 94 C E 45 SEQCRD A R ARG ARG 42 95 C E 45 SEQCRD A C CYS CYS 43 96 C E 45 SEQCRD A S SER SER 44 97 C E 45 SEQCRD A M MET MET 45 98 C E 45 SEQCRD A F PHE PHE 46 99 C E 45 SEQCRD A I ILE ILE 47 100 C E 45 SEQCRD A C CYS CYS 48 101 C E 45 SEQCRD A R ARG ARG 49 102 C E 45 SEQCRD A S SER SER 50 103 C E 45 SEQCRD A R ARG ARG 51 104 C E 45 SEQCRD A N ASN ASN 52 105 C T 45 SEQCRD A G GLY GLY 53 106 C T 45 SEQCRD A I ILE ILE 54 107 E E 4 SEQCRD A P PRO PRO 55 108 E E 4 SEQCRD A E GLU GLU 56 109 E E 4 SEQCRD A V VAL VAL 57 110 E E 4 SEQCRD A A ALA ALA 58 111 E E 4 SEQCRD A T THR THR 59 112 E E 4 SEQCRD A R ARG ARG 60 113 E E 4 SEQCRD A L LEU LEU 61 114 E E 4 SEQCRD A L LEU LEU 62 115 E E 4 SEQCRD A N ASN ASN 63 116 E E 4 SEQCRD A V VAL VAL 64 117 E E 4 SEQCRD A T THR THR 65 118 C T 45 SEQCRD A P PRO PRO 66 119 C T 45 SEQCRD A T THR THR 67 120 C T 45 SEQCRD A S SER SER 68 121 C T 45 SEQCRD A K LYS LYS 69 122 H C 45 SEQCRD A F PHE PHE 70 123 H H 4 SEQCRD A E GLU GLU 71 124 H H 4 SEQCRD A D ASP ASP 72 125 H H 4 SEQCRD A N ASN ASN 73 126 H H 4 SEQCRD A L LEU LEU 74 127 H B 45 SEQCRD A V VAL VAL 75 128 C C 4 SEQCRD A N ASN ASN 76 129 H T 45 SEQCRD A P PRO PRO 77 130 H T 45 SEQCRD A D ASP ASP 78 131 H T 45 SEQCRD A K LYS LYS 79 132 H T 45 SEQCRD A E GLU GLU 80 133 H T 45 SEQCRD A T THR THR 81 134 C C 4 SEQCRD A V VAL VAL 82 135 E E 4 SEQCRD A F PHE PHE 83 136 E E 4 SEQCRD A P PRO PRO 84 137 C E 45 SEQCRD A L LEU LEU 85 138 C T 45 SEQCRD A D ASP ASP 86 139 C T 45 SEQCRD A I ILE ILE 87 140 C T 45 SEQCRD A G GLY GLY 88 141 H C 45 SEQCRD A I ILE ILE 89 142 H H 4 SEQCRD A A ALA ALA 90 143 H H 4 SEQCRD A G GLY GLY 91 144 H H 4 SEQCRD A W TRP TRP 92 145 H H 4 SEQCRD A V VAL VAL 93 146 H H 4 SEQCRD A A ALA ALA 94 147 H H 4 SEQCRD A H HIS HIS 95 148 H H 4 SEQCRD A T THR THR 96 149 H H 4 SEQCRD A K LYS LYS 97 150 H C 45 SEQCRD A K LYS LYS 98 151 C C 4 SEQCRD A F PHE PHE 99 152 C C 4 SEQCRD A F PHE PHE 100 153 E E 4 SEQCRD A N ASN ASN 101 154 E E 4 SEQCRD A I ILE ILE 102 155 E E 4 SEQCRD A P PRO PRO 103 156 C T 45 SEQCRD A D ASP ASP 104 157 H T 45 SEQCRD A V VAL VAL 105 158 H G 45 SEQCRD A K LYS LYS 106 159 H G 45 SEQCRD A K LYS LYS 107 160 H G 45 SEQCRD A N ASN ASN 108 161 H T 45 SEQCRD A N ASN ASN 109 162 C T 45 SEQCRD A H HIS HIS 110 163 C T 45 SEQCRD A F PHE PHE 111 164 C T 45 SEQCRD A S SER SER 112 165 C C 4 SEQCRD A D ASP ASP 113 166 H H 4 SEQCRD A Y TYR TYR 114 167 H H 4 SEQCRD A L LEU LEU 115 168 H H 4 SEQCRD A D ASP ASP 116 169 H H 4 SEQCRD A K LYS LYS 117 170 H H 4 SEQCRD A K LYS LYS 118 171 H H 4 SEQCRD A T THR THR 119 172 H H 4 SEQCRD A G GLY GLY 120 173 H C 45 SEQCRD A Y TYR TYR 121 174 C C 4 SEQCRD A T THR THR 122 175 C C 4 SEQCRD A T THR THR 123 176 C C 4 SEQCRD A V VAL VAL 124 177 C C 4 SEQCRD A N ASN ASN 125 178 C C 4 SEQCRD A M MET MET 126 179 E E 4 SEQCRD A M MET MET 127 180 E E 4 SEQCRD A A ALA ALA 128 181 E E 4 SEQCRD A I ILE ILE 129 182 E E 4 SEQCRD A P PRO PRO 130 183 E E 4 SEQCRD A I ILE ILE 131 184 E E 4 SEQCRD A T THR THR 132 185 E E 4 SEQCRD A Q GLN GLN 133 186 E E 4 SEQCRD A G GLY GLY 134 187 C T 45 SEQCRD A K LYS LYS 135 188 C T 45 SEQCRD A E GLU GLU 136 189 E E 4 SEQCRD A V VAL VAL 137 190 E E 4 SEQCRD A L LEU LEU 138 191 E E 4 SEQCRD A A ALA ALA 139 192 E E 4 SEQCRD A V VAL VAL 140 193 E E 4 SEQCRD A V VAL VAL 141 194 E E 4 SEQCRD A M MET MET 142 195 E E 4 SEQCRD A A ALA ALA 143 196 E E 4 SEQCRD A L LEU LEU 144 197 E E 4 SEQCRD A N ASN ASN 145 198 E E 4 SEQCRD A K LYS LYS 146 199 E E 4 SEQCRD A L LEU LEU 147 200 C T 45 SEQCRD A N ASN ASN 148 201 C T 45 SEQCRD A A ALA ALA 149 202 C T 45 SEQCRD A S SER SER 150 203 C C 4 SEQCRD A E GLU GLU 151 204 C C 4 SEQCRD A F PHE PHE 152 205 C C 4 SEQCRD A S SER SER 153 206 H C 45 SEQCRD A K LYS LYS 154 207 H H 4 SEQCRD A E GLU GLU 155 208 H H 4 SEQCRD A D ASP ASP 156 209 H H 4 SEQCRD A E GLU GLU 157 210 H H 4 SEQCRD A E GLU GLU 158 211 H H 4 SEQCRD A V VAL VAL 159 212 H H 4 SEQCRD A F PHE PHE 160 213 H H 4 SEQCRD A K LYS LYS 161 214 H H 4 SEQCRD A K LYS LYS 162 215 H H 4 SEQCRD A Y TYR TYR 163 216 H H 4 SEQCRD A L LEU LEU 164 217 H H 4 SEQCRD A N ASN ASN 165 218 H H 4 SEQCRD A F PHE PHE 166 219 H H 4 SEQCRD A I ILE ILE 167 220 H H 4 SEQCRD A S SER SER 168 221 H H 4 SEQCRD A L LEU LEU 169 222 H H 4 SEQCRD A V VAL VAL 170 223 H H 4 SEQCRD A L LEU LEU 171 224 H C 45 SEQCRD A R ARG ARG 172 225 C C 4 SEQCRD A L LEU --- 173 - - - 367 SEQCRD A E GLU --- 174 - - - 367 SEQCRD A H HIS --- 175 - - - 367 SEQCRD A H HIS --- 176 - - - 367 SEQCRD A H HIS --- 177 - - - 367 SEQCRD A H HIS --- 178 - - - 367 SEQCRD A H HIS --- 179 - - - 367 SEQCRD A H HIS --- 180 - - - 367 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 18 No ATOM record S2CERR 4 342 SEQRES and ATOM residue numbers differ S2CERR 5 113 PDB and STRIDE secondary structures differ S2CERR 6 18 PDB secondary structure is absent S2CERR 7 18 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.57 PARAME R-factor .22245 PARAME B-factor 68.876 COMMNT COMMNT Reference database information: DATABA source: DATABA UNP: PDE6C_CHICK (P52731) COMMNT DATABA mutation: DATABA GLU B 174 --> ? ? 'EXPRESSION TAG' DATABA HIS A 175 --> ? ? 'EXPRESSION TAG' DATABA GLU A 174 --> ? ? 'EXPRESSION TAG' DATABA HIS A 178 --> ? ? 'EXPRESSION TAG' DATABA HIS B 177 --> ? ? 'EXPRESSION TAG' DATABA HIS B 176 --> ? ? 'EXPRESSION TAG' DATABA ALA B 40 --> ARG 93 'SEE REMARK 999' DATABA LEU B 173 --> ? ? 'EXPRESSION TAG' DATABA LEU A 173 --> ? ? 'EXPRESSION TAG' DATABA ALA A 40 --> ARG 93 'SEE REMARK 999' DATABA MET B 1 --> ? ? 'EXPRESSION TAG' DATABA HIS A 180 --> ? ? 'EXPRESSION TAG' DATABA HIS B 175 --> ? ? 'EXPRESSION TAG' DATABA HIS B 179 --> ? ? 'EXPRESSION TAG' DATABA HIS A 177 --> ? ? 'EXPRESSION TAG' DATABA HIS B 180 --> ? ? 'EXPRESSION TAG' DATABA HIS B 178 --> ? ? 'EXPRESSION TAG' DATABA MET A 1 --> ? ? 'EXPRESSION TAG' DATABA HIS A 176 --> ? ? 'EXPRESSION TAG' DATABA HIS A 179 --> ? ? 'EXPRESSION TAG'