HEADSC 3vie COMMNT S2C correlation file created: Thu Apr 25 11:33:28 EDT 2013 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT dunbrack.fccc.edu/Guoli/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD E X ACE ACE 1 34 C - 147 SEQCRD E S SER SER 2 35 H H 4 SEQCRD E G GLY GLY 3 36 H H 4 SEQCRD E I ILE ILE 4 37 H H 4 SEQCRD E V VAL VAL 5 38 H H 4 SEQCRD E Q GLN GLN 6 39 H H 4 SEQCRD E Q GLN GLN 7 40 H H 4 SEQCRD E Q GLN GLN 8 41 H H 4 SEQCRD E N ASN ASN 9 42 H H 4 SEQCRD E N ASN ASN 10 43 H H 4 SEQCRD E L LEU LEU 11 44 H H 4 SEQCRD E L LEU LEU 12 45 H H 4 SEQCRD E R ARG ARG 13 46 H H 4 SEQCRD E A ALA ALA 14 47 H H 4 SEQCRD E I ILE ILE 15 48 H H 4 SEQCRD E E GLU GLU 16 49 H H 4 SEQCRD E A ALA ALA 17 50 H H 4 SEQCRD E Q GLN GLN 18 51 H H 4 SEQCRD E Q GLN GLN 19 52 H H 4 SEQCRD E H HIS HIS 20 53 H H 4 SEQCRD E L LEU LEU 21 54 H H 4 SEQCRD E L LEU LEU 22 55 H H 4 SEQCRD E Q GLN GLN 23 56 H H 4 SEQCRD E L LEU LEU 24 57 H H 4 SEQCRD E T THR THR 25 58 H H 4 SEQCRD E V VAL VAL 26 59 H H 4 SEQCRD E W TRP TRP 27 60 H H 4 SEQCRD E G GLY GLY 28 61 H H 4 SEQCRD E I ILE ILE 29 62 H H 4 SEQCRD E K LYS LYS 30 63 H H 4 SEQCRD E Q GLN GLN 31 64 H H 4 SEQCRD E L LEU LEU 32 65 H H 4 SEQCRD E Q GLN GLN 33 66 H H 4 SEQCRD E A ALA ALA 34 67 H H 4 SEQCRD E R ARG ARG 35 68 H H 4 SEQCRD E I ILE ILE 36 69 H H 4 SEQCRD E L LEU LEU 37 70 H C 45 SEQCRD B X ACE ACE 1 115 C - 147 SEQCRD B S SER SER 2 116 H H 4 SEQCRD B W TRP TRP 3 117 H H 4 SEQCRD B E GLU GLU 4 118 H H 4 SEQCRD B T THR THR 5 119 H H 4 SEQCRD B W TRP TRP 6 120 H H 4 SEQCRD B E GLU GLU 7 121 H H 4 SEQCRD B R ARG ARG 8 122 H H 4 SEQCRD B E GLU GLU 9 123 H H 4 SEQCRD B I ILE ILE 10 124 H H 4 SEQCRD B E GLU GLU 11 125 H H 4 SEQCRD B N ASN ASN 12 126 H H 4 SEQCRD B Y TYR TYR 13 127 H H 4 SEQCRD B T THR THR 14 128 H H 4 SEQCRD B R ARG ARG 15 129 H H 4 SEQCRD B Q GLN GLN 16 130 H H 4 SEQCRD B I ILE ILE 17 131 H H 4 SEQCRD B Y TYR TYR 18 132 H H 4 SEQCRD B R ARG ARG 19 133 H H 4 SEQCRD B I ILE ILE 20 134 H H 4 SEQCRD B L LEU LEU 21 135 H H 4 SEQCRD B E GLU GLU 22 136 H H 4 SEQCRD B E GLU GLU 23 137 H H 4 SEQCRD B S SER SER 24 138 H H 4 SEQCRD B Q GLN GLN 25 139 H H 4 SEQCRD B E GLU GLU 26 140 H H 4 SEQCRD B Q GLN GLN 27 141 H H 4 SEQCRD B Q GLN GLN 28 142 H H 4 SEQCRD B D ASP ASP 29 143 H H 4 SEQCRD B R ARG ARG 30 144 H H 4 SEQCRD B N ASN ASN 31 145 H H 4 SEQCRD B E GLU GLU 32 146 H H 4 SEQCRD B R ARG ARG 33 147 H H 4 SEQCRD B D ASP ASP 34 148 H H 4 SEQCRD B L LEU LEU 35 149 H H 4 SEQCRD B L LEU LEU 36 150 H H 4 SEQCRD B E GLU GLU 37 151 H C 45 SEQCRD D X ACE ACE 1 115 C - 147 SEQCRD D S SER SER 2 116 H H 4 SEQCRD D W TRP TRP 3 117 H H 4 SEQCRD D E GLU GLU 4 118 H H 4 SEQCRD D T THR THR 5 119 H H 4 SEQCRD D W TRP TRP 6 120 H H 4 SEQCRD D E GLU GLU 7 121 H H 4 SEQCRD D R ARG ARG 8 122 H H 4 SEQCRD D E GLU GLU 9 123 H H 4 SEQCRD D I ILE ILE 10 124 H H 4 SEQCRD D E GLU GLU 11 125 H H 4 SEQCRD D N ASN ASN 12 126 H H 4 SEQCRD D Y TYR TYR 13 127 H H 4 SEQCRD D T THR THR 14 128 H H 4 SEQCRD D R ARG ARG 15 129 H H 4 SEQCRD D Q GLN GLN 16 130 H H 4 SEQCRD D I ILE ILE 17 131 H H 4 SEQCRD D Y TYR TYR 18 132 H H 4 SEQCRD D R ARG ARG 19 133 H H 4 SEQCRD D I ILE ILE 20 134 H H 4 SEQCRD D L LEU LEU 21 135 H H 4 SEQCRD D E GLU GLU 22 136 H H 4 SEQCRD D E GLU GLU 23 137 H H 4 SEQCRD D S SER SER 24 138 H H 4 SEQCRD D Q GLN GLN 25 139 H H 4 SEQCRD D E GLU GLU 26 140 H H 4 SEQCRD D Q GLN GLN 27 141 H H 4 SEQCRD D Q GLN GLN 28 142 H H 4 SEQCRD D D ASP ASP 29 143 H H 4 SEQCRD D R ARG ARG 30 144 H H 4 SEQCRD D N ASN ASN 31 145 H H 4 SEQCRD D E GLU GLU 32 146 H H 4 SEQCRD D R ARG ARG 33 147 H H 4 SEQCRD D D ASP ASP 34 148 H H 4 SEQCRD D L LEU LEU 35 149 H H 4 SEQCRD D L LEU LEU 36 150 H H 4 SEQCRD D E GLU GLU 37 151 H C 45 SEQCRD F X ACE ACE 1 115 C - 147 SEQCRD F S SER SER 2 116 H H 4 SEQCRD F W TRP TRP 3 117 H H 4 SEQCRD F E GLU GLU 4 118 H H 4 SEQCRD F T THR THR 5 119 H H 4 SEQCRD F W TRP TRP 6 120 H H 4 SEQCRD F E GLU GLU 7 121 H H 4 SEQCRD F R ARG ARG 8 122 H H 4 SEQCRD F E GLU GLU 9 123 H H 4 SEQCRD F I ILE ILE 10 124 H H 4 SEQCRD F E GLU GLU 11 125 H H 4 SEQCRD F N ASN ASN 12 126 H H 4 SEQCRD F Y TYR TYR 13 127 H H 4 SEQCRD F T THR THR 14 128 H H 4 SEQCRD F R ARG ARG 15 129 H H 4 SEQCRD F Q GLN GLN 16 130 H H 4 SEQCRD F I ILE ILE 17 131 H H 4 SEQCRD F Y TYR TYR 18 132 H H 4 SEQCRD F R ARG ARG 19 133 H H 4 SEQCRD F I ILE ILE 20 134 H H 4 SEQCRD F L LEU LEU 21 135 H H 4 SEQCRD F E GLU GLU 22 136 H H 4 SEQCRD F E GLU GLU 23 137 H H 4 SEQCRD F S SER SER 24 138 H H 4 SEQCRD F Q GLN GLN 25 139 H H 4 SEQCRD F E GLU GLU 26 140 H H 4 SEQCRD F Q GLN GLN 27 141 H H 4 SEQCRD F Q GLN GLN 28 142 H H 4 SEQCRD F D ASP ASP 29 143 H H 4 SEQCRD F R ARG ARG 30 144 H H 4 SEQCRD F N ASN ASN 31 145 H H 4 SEQCRD F E GLU GLU 32 146 H H 4 SEQCRD F R ARG ARG 33 147 H H 4 SEQCRD F D ASP ASP 34 148 H H 4 SEQCRD F L LEU LEU 35 149 H H 4 SEQCRD F L LEU LEU 36 150 H C 45 SEQCRD F E GLU GLU 37 151 C C 4 SEQCRD C X ACE ACE 1 34 C - 147 SEQCRD C S SER SER 2 35 H H 4 SEQCRD C G GLY GLY 3 36 H H 4 SEQCRD C I ILE ILE 4 37 H H 4 SEQCRD C V VAL VAL 5 38 H H 4 SEQCRD C Q GLN GLN 6 39 H H 4 SEQCRD C Q GLN GLN 7 40 H H 4 SEQCRD C Q GLN GLN 8 41 H H 4 SEQCRD C N ASN ASN 9 42 H H 4 SEQCRD C N ASN ASN 10 43 H H 4 SEQCRD C L LEU LEU 11 44 H H 4 SEQCRD C L LEU LEU 12 45 H H 4 SEQCRD C R ARG ARG 13 46 H H 4 SEQCRD C A ALA ALA 14 47 H H 4 SEQCRD C I ILE ILE 15 48 H H 4 SEQCRD C E GLU GLU 16 49 H H 4 SEQCRD C A ALA ALA 17 50 H H 4 SEQCRD C Q GLN GLN 18 51 H H 4 SEQCRD C Q GLN GLN 19 52 H H 4 SEQCRD C H HIS HIS 20 53 H H 4 SEQCRD C L LEU LEU 21 54 H H 4 SEQCRD C L LEU LEU 22 55 H H 4 SEQCRD C Q GLN GLN 23 56 H H 4 SEQCRD C L LEU LEU 24 57 H H 4 SEQCRD C T THR THR 25 58 H H 4 SEQCRD C V VAL VAL 26 59 H H 4 SEQCRD C W TRP TRP 27 60 H H 4 SEQCRD C G GLY GLY 28 61 H H 4 SEQCRD C I ILE ILE 29 62 H H 4 SEQCRD C K LYS LYS 30 63 H H 4 SEQCRD C Q GLN GLN 31 64 H H 4 SEQCRD C L LEU LEU 32 65 H H 4 SEQCRD C Q GLN GLN 33 66 H H 4 SEQCRD C A ALA ALA 34 67 H H 4 SEQCRD C R ARG ARG 35 68 H H 4 SEQCRD C I ILE ILE 36 69 H H 4 SEQCRD C L LEU LEU 37 70 H C 45 SEQCRD A X ACE ACE 1 34 C - 147 SEQCRD A S SER SER 2 35 H H 4 SEQCRD A G GLY GLY 3 36 H H 4 SEQCRD A I ILE ILE 4 37 H H 4 SEQCRD A V VAL VAL 5 38 H H 4 SEQCRD A Q GLN GLN 6 39 H H 4 SEQCRD A Q GLN GLN 7 40 H H 4 SEQCRD A Q GLN GLN 8 41 H H 4 SEQCRD A N ASN ASN 9 42 H H 4 SEQCRD A N ASN ASN 10 43 H H 4 SEQCRD A L LEU LEU 11 44 H H 4 SEQCRD A L LEU LEU 12 45 H H 4 SEQCRD A R ARG ARG 13 46 H H 4 SEQCRD A A ALA ALA 14 47 H H 4 SEQCRD A I ILE ILE 15 48 H H 4 SEQCRD A E GLU GLU 16 49 H H 4 SEQCRD A A ALA ALA 17 50 H H 4 SEQCRD A Q GLN GLN 18 51 H H 4 SEQCRD A Q GLN GLN 19 52 H H 4 SEQCRD A H HIS HIS 20 53 H H 4 SEQCRD A L LEU LEU 21 54 H H 4 SEQCRD A L LEU LEU 22 55 H H 4 SEQCRD A Q GLN GLN 23 56 H H 4 SEQCRD A L LEU LEU 24 57 H H 4 SEQCRD A T THR THR 25 58 H H 4 SEQCRD A V VAL VAL 26 59 H H 4 SEQCRD A W TRP TRP 27 60 H H 4 SEQCRD A G GLY GLY 28 61 H H 4 SEQCRD A I ILE ILE 29 62 H H 4 SEQCRD A K LYS LYS 30 63 H H 4 SEQCRD A Q GLN GLN 31 64 H H 4 SEQCRD A L LEU LEU 32 65 H H 4 SEQCRD A Q GLN GLN 33 66 H H 4 SEQCRD A A ALA ALA 34 67 H H 4 SEQCRD A R ARG ARG 35 68 H H 4 SEQCRD A I ILE ILE 36 69 H C 45 SEQCRD A L LEU --- 37 - - - 367 COMMNT S2CERR 1 6 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 1 No ATOM record S2CERR 4 221 SEQRES and ATOM residue numbers differ S2CERR 5 6 PDB and STRIDE secondary structures differ S2CERR 6 1 PDB secondary structure is absent S2CERR 7 7 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 1.800 PARAME R-factor 0.1837 PARAME B-factor 31.7329 COMMNT COMMNT Reference database information: DATABA source: DATABA UNP: Q9YP39_9HIV1 (Q9YP39) DATABA PDB: 3VIE (3VIE) COMMNT DATABA mutation: DATABA ACE E 1 --> ? ? ACETYLATION DATABA ACE C 1 --> ? ? ACETYLATION DATABA ACE A 1 --> ? ? ACETYLATION