HEADSC 3ygs COMMNT S2C correlation file created: Sun Dec 28 08:31:27 EST 2003 COMMNT COMMNT If you use this database, please cite: COMMNT COMMNT Guoli Wang, Jonathan W. Arthur, and Roland L. Dunbrack, Jr. COMMNT "S2C: A database correlating sequence and atomic COMMNT coordinate numbering in the Protein Data Bank" COMMNT www.fccc.edu/research/labs/dubrack/s2c COMMNT Copyright (c) February 2000, April 2002. COMMNT COMMNT SEQCRD columns are as follows: COMMNT COMMNT Column Positions Item COMMNT 1 0-6 Record identifier COMMNT 2 8 Chain COMMNT 3 10 One letter residue code COMMNT 4 12-14 SEQRES three letter residue code COMMNT 5 16-18 ATOM three letter residue code COMMNT 6 20-24 SEQRES residue number COMMNT 7 26-31 ATOM residue number COMMNT 8 33 PDB secondary structure COMMNT 9 35 STRIDE secondary structure COMMNT 10 37-43 Error flags COMMNT COMMNT Secondary structrue annotation: COMMNT H: Helix E: Strand T: Turn COMMNT B: Bridge G: 310Helix C: Coil COMMNT SEQCRD C M MET MET 1 1 C C - SEQCRD C D ASP ASP 2 2 C C - SEQCRD C A ALA ALA 3 3 H H - SEQCRD C K LYS LYS 4 4 H H - SEQCRD C A ALA ALA 5 5 H H - SEQCRD C R ARG ARG 6 6 H H - SEQCRD C N ASN ASN 7 7 H H - SEQCRD C C CYS CYS 8 8 H H - SEQCRD C L LEU LEU 9 9 H H - SEQCRD C L LEU LEU 10 10 H H - SEQCRD C Q GLN GLN 11 11 H H - SEQCRD C H HIS HIS 12 12 H H - SEQCRD C R ARG ARG 13 13 H H - SEQCRD C E GLU GLU 14 14 H H - SEQCRD C A ALA ALA 15 15 H H - SEQCRD C L LEU LEU 16 16 H H - SEQCRD C E GLU GLU 17 17 H H - SEQCRD C K LYS LYS 18 18 C H 5 SEQCRD C D ASP ASP 19 19 C C - SEQCRD C I ILE ILE 20 20 C C - SEQCRD C K LYS LYS 21 21 C C - SEQCRD C T THR THR 22 22 H H - SEQCRD C S SER SER 23 23 H H - SEQCRD C Y TYR TYR 24 24 H H - SEQCRD C I ILE ILE 25 25 H H - SEQCRD C M MET MET 26 26 H H - SEQCRD C D ASP ASP 27 27 H H - SEQCRD C H HIS HIS 28 28 H H - SEQCRD C M MET MET 29 29 H H - SEQCRD C I ILE ILE 30 30 H H - SEQCRD C S SER SER 31 31 H H - SEQCRD C D ASP ASP 32 32 H H - SEQCRD C G GLY GLY 33 33 C C - SEQCRD C F PHE PHE 34 34 C C - SEQCRD C L LEU LEU 35 35 C C - SEQCRD C T THR THR 36 36 C C - SEQCRD C I ILE ILE 37 37 H H - SEQCRD C S SER SER 38 38 H H - SEQCRD C E GLU GLU 39 39 H H - SEQCRD C E GLU GLU 40 40 H H - SEQCRD C E GLU GLU 41 41 H H - SEQCRD C K LYS LYS 42 42 H H - SEQCRD C V VAL VAL 43 43 H H - SEQCRD C R ARG ARG 44 44 H H - SEQCRD C N ASN ASN 45 45 C H 5 SEQCRD C E GLU GLU 46 46 C C - SEQCRD C P PRO PRO 47 47 C C - SEQCRD C T THR THR 48 48 C C - SEQCRD C Q GLN GLN 49 49 H H - SEQCRD C Q GLN GLN 50 50 H H - SEQCRD C Q GLN GLN 51 51 H H - SEQCRD C R ARG ARG 52 52 H H - SEQCRD C A ALA ALA 53 53 H H - SEQCRD C A ALA ALA 54 54 H H - SEQCRD C M MET MET 55 55 H H - SEQCRD C L LEU LEU 56 56 H H - SEQCRD C I ILE ILE 57 57 H H - SEQCRD C K LYS LYS 58 58 H H - SEQCRD C M MET MET 59 59 H H - SEQCRD C I ILE ILE 60 60 H H - SEQCRD C L LEU LEU 61 61 H H - SEQCRD C K LYS LYS 62 62 H H - SEQCRD C K LYS LYS 63 63 C C - SEQCRD C D ASP ASP 64 64 C C - SEQCRD C N ASN ASN 65 65 H H - SEQCRD C D ASP ASP 66 66 H H - SEQCRD C S SER SER 67 67 H H - SEQCRD C Y TYR TYR 68 68 H H - SEQCRD C V VAL VAL 69 69 H H - SEQCRD C S SER SER 70 70 H H - SEQCRD C F PHE PHE 71 71 H H - SEQCRD C Y TYR TYR 72 72 H H - SEQCRD C N ASN ASN 73 73 H H - SEQCRD C A ALA ALA 74 74 H H - SEQCRD C L LEU LEU 75 75 H H - SEQCRD C L LEU LEU 76 76 H H - SEQCRD C H HIS HIS 77 77 H H - SEQCRD C E GLU GLU 78 78 C H 5 SEQCRD C G GLY GLY 79 79 C C - SEQCRD C Y TYR TYR 80 80 C C - SEQCRD C K LYS LYS 81 81 H H - SEQCRD C D ASP ASP 82 82 H H - SEQCRD C L LEU LEU 83 83 H H - SEQCRD C A ALA ALA 84 84 H H - SEQCRD C A ALA ALA 85 85 H H - SEQCRD C L LEU LEU 86 86 H H - SEQCRD C L LEU LEU 87 87 H H - SEQCRD C H HIS HIS 88 88 H T 5 SEQCRD C D ASP ASP 89 89 H T 5 SEQCRD C G GLY GLY 90 90 H T 5 SEQCRD C I ILE ILE 91 91 C T 5 SEQCRD C P PRO PRO 92 92 C C - SEQCRD C V VAL VAL 93 93 C C - SEQCRD C V VAL VAL 94 94 C C - SEQCRD C S SER SER 95 95 C C - SEQCRD P S SER SER 1 1 C C - SEQCRD P M MET MET 2 2 C C - SEQCRD P D ASP ASP 3 3 C C - SEQCRD P E GLU GLU 4 4 H H - SEQCRD P A ALA ALA 5 5 H H - SEQCRD P D ASP ASP 6 6 H H - SEQCRD P R ARG ARG 7 7 H H - SEQCRD P R ARG ARG 8 8 H H - SEQCRD P L LEU LEU 9 9 H H - SEQCRD P L LEU LEU 10 10 H H - SEQCRD P R ARG ARG 11 11 H H - SEQCRD P R ARG ARG 12 12 H H - SEQCRD P C CYS CYS 13 13 C H 5 SEQCRD P R ARG ARG 14 14 H H - SEQCRD P L LEU LEU 15 15 H H - SEQCRD P R ARG ARG 16 16 H H - SEQCRD P L LEU LEU 17 17 H H - SEQCRD P V VAL VAL 18 18 H H - SEQCRD P E GLU GLU 19 19 H H - SEQCRD P E GLU GLU 20 20 H H - SEQCRD P L LEU LEU 21 21 C C - SEQCRD P Q GLN GLN 22 22 C C - SEQCRD P V VAL VAL 23 23 C T 5 SEQCRD P D ASP ASP 24 24 C T 5 SEQCRD P Q GLN GLN 25 25 C T 5 SEQCRD P L LEU LEU 26 26 C H 5 SEQCRD P W TRP TRP 27 27 H H - SEQCRD P D ASP ASP 28 28 H H - SEQCRD P V VAL VAL 29 29 H H - SEQCRD P L LEU LEU 30 30 H H - SEQCRD P L LEU LEU 31 31 H H - SEQCRD P S SER SER 32 32 H H - SEQCRD P R ARG ARG 33 33 C H 5 SEQCRD P E GLU GLU 34 34 C T 5 SEQCRD P L LEU LEU 35 35 C T 5 SEQCRD P F PHE PHE 36 36 C T 5 SEQCRD P R ARG ARG 37 37 C T 5 SEQCRD P P PRO PRO 38 38 H H - SEQCRD P H HIS HIS 39 39 H H - SEQCRD P M MET MET 40 40 H H - SEQCRD P I ILE ILE 41 41 H H - SEQCRD P E GLU GLU 42 42 H H - SEQCRD P D ASP ASP 43 43 H H - SEQCRD P I ILE ILE 44 44 H H - SEQCRD P Q GLN GLN 45 45 H H - SEQCRD P R ARG ARG 46 46 C H 5 SEQCRD P A ALA ALA 47 47 C T 5 SEQCRD P G GLY GLY 48 48 C T 5 SEQCRD P S SER SER 49 49 C T 5 SEQCRD P G GLY GLY 50 50 C T 5 SEQCRD P S SER SER 51 51 C C - SEQCRD P R ARG ARG 52 52 H H - SEQCRD P R ARG ARG 53 53 H H - SEQCRD P D ASP ASP 54 54 H H - SEQCRD P Q GLN GLN 55 55 H H - SEQCRD P A ALA ALA 56 56 H H - SEQCRD P R ARG ARG 57 57 H H - SEQCRD P Q GLN GLN 58 58 H H - SEQCRD P L LEU LEU 59 59 H H - SEQCRD P I ILE ILE 60 60 H H - SEQCRD P I ILE ILE 61 61 H H - SEQCRD P D ASP ASP 62 62 H H - SEQCRD P L LEU LEU 63 63 H H - SEQCRD P E GLU GLU 64 64 H H - SEQCRD P T THR THR 65 65 H C 5 SEQCRD P R ARG ARG 66 66 C C - SEQCRD P G GLY GLY 67 67 C C - SEQCRD P S SER SER 68 68 C C - SEQCRD P Q GLN GLN 69 69 C H 5 SEQCRD P A ALA ALA 70 70 H H - SEQCRD P L LEU LEU 71 71 H H - SEQCRD P P PRO PRO 72 72 H H - SEQCRD P L LEU LEU 73 73 H H - SEQCRD P F PHE PHE 74 74 H H - SEQCRD P I ILE ILE 75 75 H H - SEQCRD P S SER SER 76 76 H H - SEQCRD P C CYS CYS 77 77 H H - SEQCRD P L LEU LEU 78 78 H H - SEQCRD P E GLU GLU 79 79 H H - SEQCRD P D ASP ASP 80 80 H H - SEQCRD P T THR THR 81 81 H C 5 SEQCRD P G GLY GLY 82 82 C C - SEQCRD P Q GLN GLN 83 83 C C - SEQCRD P D ASP ASP 84 84 H H - SEQCRD P M MET MET 85 85 H H - SEQCRD P L LEU LEU 86 86 H H - SEQCRD P A ALA ALA 87 87 H H - SEQCRD P S SER SER 88 88 H H - SEQCRD P F PHE PHE 89 89 H H - SEQCRD P L LEU LEU 90 90 H H - SEQCRD P R ARG ARG 91 91 H H - SEQCRD P T THR THR 92 92 H H - SEQCRD P N ASN ASN 93 93 H H - SEQCRD P R ARG ARG 94 94 H H - SEQCRD P Q GLN GLN 95 95 H H - SEQCRD P A ALA ALA 96 96 C T 5 SEQCRD P G GLY GLY 97 97 C T 5 COMMNT S2CERR 1 0 No standard amino acid code S2CERR 2 0 SEQRES and ATOM residue names differ S2CERR 3 0 No ATOM record S2CERR 4 0 SEQRES and ATOM residue numbers differ S2CERR 5 27 PDB and STRIDE secondary structures differ S2CERR 6 0 PDB secondary structure is absent S2CERR 7 0 STRIDE secondary structure is absent COMMNT COMMNT Crystallographic technical parameters: PARAME method 'X-RAY DIFFRACTION' PARAME resolution 2.5 PARAME R-factor ? PARAME B-factor ? COMMNT COMMNT Reference database information: DATABA source: DATABA SWS: APAF_HUMAN (?) DATABA SWS: ICE9_HUMAN (?) COMMNT DATABA mutation: DATABA SER P 1 --> ? ? 'CLONING ARTIFACT'