| external resource | short description |
|---|
| CATH | Protein Structure Classification |
|
CSU
|
(Contacts of Structural Units) Analysis of interatomic contacts in PDB entries
|
| Dali/FSSP | Families of Structurally Similar Proteins |
| Dipole | Dipole moments of proteins |
| EcoGene | Collection of information about the genes, proteins, and intergenic regions of the E. coli K-12 genome and proteome |
| ENZYME | Enzyme nomenclature database |
| Flybase | Database of the Drosophila Genome |
| GeneCards | Database of human genes, their products and their involvement in diseases. |
|
GeneCensus
|
Comprehensive statistical accounting of protein features, particularly
structural ones, in genomes -- in the sense of a demographic census.
|
| GPCRDB | Information system for G protein-coupled receptors. |
| IMB Jena Image Library | of Biological Macromolecules. |
|
LED
|
Lipase Engineering Database.
|
|
LPC
|
(Ligand-Protein Contacts) Analysis of interatomic Contacts in Ligand-Protein complexes
|
|
MGD
| Mouse Genome Database |
|
MMDB
|
NCBI's Structure Database
|
|
MolMovDB
|
Database of Macromolecular Movements
|
| MSD | Collection, management and distribution of data about macromolecular structures |
| Noncovalent bond finder | Displays the closest contacts to ligand or interface, reports distances, walks over water bridges. |
| OLDERADO | Core, domain and representative structure database |
| OMIM | Comprehensive catalog of inherited diseases. |
| OPM |
Orientations of Proteins in Membranes. |
| PDB | Repository for the processing and distribution of 3-D macromolecular structure data primarily determined experimentally by X-ray crystallography and NMR. |
| PDBobs | Obsolete entries from the Protein Data Bank |
| PDBREPORT | Structure verification reports for X-ray structures |
| PDBselect | Subset of the structures in the PDB that does not contain (highly) homolog sequences. |
| PDBSum | Summaries and structural analyses of PDB data files |
| Pfam | Database of multiple alignments of protein domains or conserved protein regions. |
|
PQS
|
Protein Quaternary Structure, EBI
|
|
Protein Explorer
|
Structure visualization: Chime with command line (understands all RasMol
commands) plus shortcuts, contact surfaces, color keys, help
|
| ProtoMap
|
Automatic hierarchical classification of all swissprot proteins.
|
| PubMed | Biomedical journal citations database. |
| SCOP | Structural Classification of Proteins |
| SCOR | Structural Classification of RNA |
|
SMART
|
Simple Modular Architecture Research Tool
|
| SWISS-PROT | Curated protein sequence database. |
| Taxonomy Browser | Taxonomy database maintained by NCBI/GenBank. |
| TOPS | The Atlas of protein topology cartoons. |