1AA3 Double-Stranded Dna Binding Domain date Jan 22, 1997
title C-Terminal Domain Of The E. Coli Reca, Nmr, Minimized Averag Structure
authors H.Aihara, Y.Ito, H.Kurumizaka, T.Terada, S.Yokoyama, T.Shibata, Ri Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Reca
Chain: A
Fragment: C-Terminal Domain
 Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
methodSolution NMR
related structures by homologous chain: 2REC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAn interaction between a specified surface of the C-terminal domain of RecA protein and double-stranded DNA for homologous pairing., Aihara H, Ito Y, Kurumizaka H, Terada T, Yokoyama S, Shibata T, J Mol Biol 1997 Nov 28;274(2):213-21. PMID:9398528
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (21 Kb) [Save to disk]
  • Biological Unit Coordinates (1aa3.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 1AA3
  • Original NMR restraints for 1AA3 from PDB
  • Retrieve 1AA3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AA3 from S2C, [Save to disk]
    • View 1AA3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1AA3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AA3, from MSDmotif at EBI
  • Genome occurence of 1AA3's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1aa3__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1aa3_A] [1aa3]
  • SWISS-PROT database: [P0A7G6]
  • Domain organization of [RECA_ECOLI] by SWISSPFAM
    • Other resources with information on 1AA3
  • Community annotation for 1AA3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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