1AVD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BTN, NAG enzyme
related structures by homologous chain: 1LDO, 1LDQ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree-dimensional structure of the tetragonal crystal form of egg-white avidin in its functional complex with biotin at 2.7 A resolution., Pugliese L, Coda A, Malcovati M, Bolognesi M, J Mol Biol 1993 Jun 5;231(3):698-710. PMID:8515446
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (1avd.pdb1.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 1AVD
  • CSU: Contacts of Structural Units for 1AVD
  • Likely Quarternary Molecular Structure file(s) for 1AVD
  • Structure Factors (35 Kb)
  • Retrieve 1AVD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AVD from S2C, [Save to disk]
  • Re-refined 1avd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1AVD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1avd] [1avd_A] [1avd_B]
  • SWISS-PROT database: [P02701]

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