1B6E	Nk Cell	date	Jan 14, 1999
title	Human Cd94
authors	J.C.Boyington, A.N.Riaz, A.Patamawenu, J.E.Coligan, A.G.Brooks, P.D.Sun
compound		source
Molecule: Cd94 Chain: A Fragment: C-Type Lectin Domain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell: Natural Killer Cell Cellular_location: Cell Surface Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_cellular_location: Inclusion Bodies Expression_system_vector_type: Plasmid Expression_system_plasmid: Modified Pet30
symmetry	Space Group: P 65 2 2	R_factor 0.220 R_Free 0.322
crystal cell	length a length b length c angle alpha angle beta angle gamma 91.710 91.710 84.230 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
Primary reference	Structure of CD94 reveals a novel C-type lectin fold: implications for the NK cell-associated CD94/NKG2 receptors., Boyington JC, Riaz AN, Patamawenu A, Coligan JE, Brooks AG, Sun PD, Immunity 1999 Jan;10(1):75-82. PMID:10023772

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (1b6e.pdb1.gz) 21 Kb CSU: Contacts of Structural Units for 1B6E Likely Quarternary Molecular Structure file(s) for 1B6E Retrieve 1B6E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1B6E from S2C, [Save to disk]

View 1B6E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1B6E

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1B6E, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1b6e__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1b6e_A] [1b6e] SWISS-PROT database: [Q13241] Domain organization of [KLRD1_HUMAN] by SWISSPFAM Domain found in 1B6E: [CLECT ] by SMART

Other resources with information on 1B6E

Community annotation for 1B6E at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---