1B8X Signal Protein date Feb 03, 1999
title Glutathione S-Transferase Fused With The Nuclear Matrix Targ Signal Of The Transcription Factor Aml-1
authors L.Tang, B.Guo, A.J.Van Wijnen, J.B.Lian, J.L.Stein, G.S.Stein, G.W
compound source
Molecule: Protein (Aml-1b)
Chain: A
Fragment: Nmts Fragment
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Cell_line: Bl21
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.209 R_Free 0.310
crystal
cell
length a length b length c angle alpha angle beta angle gamma
93.400 93.400 57.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
related structures by homologous chain: 1M9B, 1Y6E
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePreliminary crystallographic study of glutathione S-transferase fused with the nuclear matrix targeting signal of the transcription factor AML-1/CBF-alpha2., Tang L, Guo B, van Wijnen AJ, Lian JB, Stein JL, Stein GS, Zhou GW, J Struct Biol 1998 Sep;123(1):83-5. PMID:9774548
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (1b8x.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (1b8x.pdb2.gz) 80 Kb
  • CSU: Contacts of Structural Units for 1B8X
  • Likely Quarternary Molecular Structure file(s) for 1B8X
  • Retrieve 1B8X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1B8X from S2C, [Save to disk]
    • View 1B8X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1B8X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1B8X, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1b8xa2, region A:1-80 [Jmol] [rasmolscript] [script source]
        - Domain d1b8xa1, region A:81-260 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1b8x_A] [1b8x]
  • SWISS-PROT database: [P08515]
  • Domain organization of [GST26_SCHJA] by SWISSPFAM
    • Other resources with information on 1B8X
  • Community annotation for 1B8X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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