1BHQ	Cell Adhesion	date	Jun 10, 1998
title	Mac-1 I Domain Cadmium Complex
authors	E.T.Baldwin
compound		source
Molecule: Cd11b Chain: 1, 2 Fragment: Mac-1 Alpha Domain Synonym: Cell Surface Glycoprotein Mac-1 Alpha Subunit Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell_line: Bl21 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Plyse Expression_system_vector: Pet3c Expression_system_plasmid: Bl21
symmetry	Space Group: P 21 21 2	R_factor 0.175 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.420 122.390 75.360 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	ACE, CD	enzyme
related structures	by homologous chain: 1BHO, 1IDN
Primary reference	Cation binding to the integrin CD11b I domain and activation model assessment., Baldwin ET, Sarver RW, Bryant GL Jr, Curry KA, Fairbanks MB, Finzel BC, Garlick RL, Heinrikson RL, Horton NC, Kelley LL, Mildner AM, Moon JB, Mott JE, Mutchler VT, Tomich CS, Watenpaugh KD, Wiley VH, Structure 1998 Jul 15;6(7):923-35. PMID:9687375

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (1bhq.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 1BHQ CSU: Contacts of Structural Units for 1BHQ Likely Quarternary Molecular Structure file(s) for 1BHQ Retrieve 1BHQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1BHQ from S2C, [Save to disk]

View 1BHQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1BHQ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1BHQ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1bhq1_, region 1 [Jmol] [rasmolscript] [script source]     - Domain d1bhq2_, region 2 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1bhq] [1bhq_2] [1bhq_1] SWISS-PROT database: [P11215] Domain organization of [ITAM_HUMAN] by SWISSPFAM Domain found in 1BHQ: [VWA ] by SMART

Other resources with information on 1BHQ

Community annotation for 1BHQ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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