1BJU Serine Protease date Jun 29, 1998
title Beta-Trypsin Complexed With Acpu
authors S.Presnell, G.Patil, C.Mura, K.Jude, J.Conley, C.Kam, J.Bertrand, J L.Williams
compound source
Molecule: Beta-Trypsin
Chain: A
Ec: 3.4.21.4
Other_details: Acpu Inhibited, Room Temperature 295 K
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas
symmetry Space Group: P 21 21 21
R_factor 0.171 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.840 58.490 67.830 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand CA, DMS, GP6, SO4 enzyme Hydrolase E.C.3.4.21.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceOxyanion-mediated inhibition of serine proteases., Presnell SR, Patil GS, Mura C, Jude KM, Conley JM, Bertrand JA, Kam CM, Powers JC, Williams LD, Biochemistry. 1998 Dec 1;37(48):17068-81. PMID:9836602
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1bju.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1BJU
  • CSU: Contacts of Structural Units for 1BJU
  • Likely Quarternary Molecular Structure file(s) for 1BJU
  • Structure Factors (223 Kb)
  • Retrieve 1BJU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BJU from S2C, [Save to disk]
  • Re-refined 1bju structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1BJU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BJU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BJU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bju__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bju_A] [1bju]
  • SWISS-PROT database: [P00760]
  • Domain organization of [TRY1_BOVIN] by SWISSPFAM
  • Domain found in 1BJU: [Tryp_SPc ] by SMART
    • Other resources with information on 1BJU
  • Community annotation for 1BJU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science