1BKD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 1BKD (Molecule of the Month:pdb148)
related structures by homologous chain: 1PLK, 1PLL, 1XD2
Gene
Ontology
ChainFunctionProcessComponent
R


S


Primary referenceThe structural basis of the activation of Ras by Sos., Boriack-Sjodin PA, Margarit SM, Bar-Sagi D, Kuriyan J, Nature 1998 Jul 23;394(6691):337-43. PMID:9690470
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (1bkd.pdb1.gz) 394 Kb
  • CSU: Contacts of Structural Units for 1BKD
  • Likely Quarternary Molecular Structure file(s) for 1BKD
  • Structure Factors (207 Kb)
  • Retrieve 1BKD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BKD from S2C, [Save to disk]
  • Re-refined 1bkd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1BKD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bkd] [1bkd_R] [1bkd_S]
  • SWISS-PROT database: [P01112] [Q07889]
  • Domains found in 1BKD: [RAS] [RasGEF] [RasGEFN ] by SMART

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