1BTG Growth Factor date Aug 29, 1995
title Crystal Structure Of Beta Nerve Growth Factor At 2.5 A Resol C2 Space Group With Zn Ions Bound
authors D.R.Holland, B.W.Matthews
compound source
Molecule: Beta Nerve Growth Factor
Chain: A, B, C
Synonym: Bngf
Engineered: Yes
Mutation: Yes
Other_details: Zn Ions Bound
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Organ: Salivary Glands
symmetry Space Group: C 1 2 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.800 93.900 58.900 90.00 123.10 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand ZN enzyme
related structures by homologous chain: 1SG1
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceNerve growth factor in different crystal forms displays structural flexibility and reveals zinc binding sites., Holland DR, Cousens LS, Meng W, Matthews BW, J Mol Biol 1994 Jun 10;239(3):385-400. PMID:8201620
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1btg.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (1btg.pdb2.gz) 35 Kb
  • Biological Unit Coordinates (1btg.pdb3.gz) 35 Kb
  • Biological Unit Coordinates (1btg.pdb4.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1BTG
  • CSU: Contacts of Structural Units for 1BTG
  • Likely Quarternary Molecular Structure file(s) for 1BTG
  • Structure Factors (114 Kb)
  • Retrieve 1BTG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BTG from S2C, [Save to disk]
  • View 1BTG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BTG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BTG, from MSDmotif at EBI
  • Genome occurence of 1BTG's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1btga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1btgb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1btgc_, region C [Jmol] [rasmolscript] [script source]
  • Fold representative 1btg from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1btg] [1btg_B] [1btg_C] [1btg_A]
  • SWISS-PROT database: [P01139]
  • Domain organization of [NGF_MOUSE] by SWISSPFAM
  • Domain found in 1BTG: [NGF ] by SMART
  • Other resources with information on 1BTG
  • Community annotation for 1BTG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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