1BXH Sugar Binding Protein date Oct 02, 1998
title Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
authors D.N.Moothoo, B.Canaan, R.A.Field, J.H.Naismith
compound source
Molecule: Concanavalin-A
Chain: A, B, C, D
Fragment: Unp P02866 Residues 164-281, 30-148
Synonym: Con A
 Organism_scientific: Canavalia Ensiformis
Organism_common: Jack Bean
Organism_taxid: 3823
symmetry Space Group: P 21 21 21
R_factor 0.196 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.700 119.700 68.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand AMG, CA, MMA, MN BindingDB enzyme
related structures by homologous chain: 1CJP, 1JYC
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceMan alpha1-2 Man alpha-OMe-concanavalin A complex reveals a balance of forces involved in carbohydrate recognition., Moothoo DN, Canan B, Field RA, Naismith JH, Glycobiology 1999 Jun;9(6):539-45. PMID:10336986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (1bxh.pdb1.gz) 146 Kb
  • LPC: Ligand-Protein Contacts for 1BXH
  • CSU: Contacts of Structural Units for 1BXH
  • Likely Quarternary Molecular Structure file(s) for 1BXH
  • Structure Factors (421 Kb)
  • Retrieve 1BXH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BXH from S2C, [Save to disk]
  • Re-refined 1bxh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1BXH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BXH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bxha_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bxhb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1bxhc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1bxhd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bxh_D] [1bxh_A] [1bxh_B] [1bxh] [1bxh_C]
  • SWISS-PROT database: [P02866]
  • Domain organization of [CONA_CANEN] by SWISSPFAM
    • Other resources with information on 1BXH
  • Community annotation for 1BXH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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