1CF1 Structural Protein date Mar 23, 1999
title Arrestin From Bovine Rod Outer Segments
authors J.A.Hirsch, C.Schubert, V.V.Gurevich, P.B.Sigler
compound source
Molecule: Protein (Arrestin)
Chain: A, B, C, D
Synonym: Retinal S-Antigen, 48 Kd Protein
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Eye
Tissue: Retina
Cell: Rod Outer Segments
Cellular_location: Cytoplasm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Er2508
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptrc
symmetry Space Group: C 2 2 21
R_factor 0.233 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
168.850 193.190 191.120 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe 2.8 A crystal structure of visual arrestin: a model for arrestin's regulation., Hirsch JA, Schubert C, Gurevich VV, Sigler PB, Cell 1999 Apr 16;97(2):257-69. PMID:10219246
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk]
  • Biological Unit Coordinates (1cf1.pdb1.gz) 62 Kb
  • Biological Unit Coordinates (1cf1.pdb2.gz) 60 Kb
  • Biological Unit Coordinates (1cf1.pdb3.gz) 63 Kb
  • Biological Unit Coordinates (1cf1.pdb4.gz) 61 Kb
  • Biological Unit Coordinates (1cf1.pdb5.gz) 117 Kb
  • CSU: Contacts of Structural Units for 1CF1
  • Likely Quarternary Molecular Structure file(s) for 1CF1
  • Structure Factors (765 Kb)
  • Retrieve 1CF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CF1 from S2C, [Save to disk]
  • Re-refined 1cf1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CF1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CF1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cf1a1, region A:10-182 [Jmol] [rasmolscript] [script source]
        - Domain d1cf1a2, region A:183-393 [Jmol] [rasmolscript] [script source]
        - Domain d1cf1b2, region B:183-385 [Jmol] [rasmolscript] [script source]
        - Domain d1cf1b1, region B:9-182 [Jmol] [rasmolscript] [script source]
        - Domain d1cf1c2, region C:183-393 [Jmol] [rasmolscript] [script source]
        - Domain d1cf1c1, region C:7-182 [Jmol] [rasmolscript] [script source]
        - Domain d1cf1d2, region D:183-386 [Jmol] [rasmolscript] [script source]
        - Domain d1cf1d1, region D:9-182 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cf1] [1cf1_A] [1cf1_B] [1cf1_D] [1cf1_C]
  • SWISS-PROT database: [P08168]
  • Domain organization of [ARRS_BOVIN] by SWISSPFAM
  • Domain found in 1CF1: [Arrestin_C ] by SMART
  • Other resources with information on 1CF1
  • Community annotation for 1CF1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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