1CS0 Ligase date Aug 16, 1999
title Crystal Structure Of Carbamoyl Phosphate Synthetase Complexe Cys269 In The Small Subunit With The Tetrahedral Mimic L-Gl Gamma-Semialdehyde
authors J.B.Thoden, X.Huang, F.M.Raushel, H.M.Holden
compound source
Molecule: Carbamoyl Phosphate Synthetase: Large Subunit
Chain: A, C, E, G
Ec: 6.3.5.5
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pdp412

Molecule: Carbamoyl Phosphate Synthetase: Small Subunit
Chain: B, D, F, H
Ec: 6.3.5.5
Engineered: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pdp412
symmetry Space Group: P 21 21 21
R_factor 0.186 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
151.700 163.800 332.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ADP, CL, CYG, K, MN, NET, ORN, PO4 enzyme Ligase E.C.6.3.5.5 BRENDA
related structures by homologous chain: 1A9X, 1C30
Gene
Ontology
ChainFunctionProcessComponent
A, E, C, G


F, B, H, D


Primary referenceThe small subunit of carbamoyl phosphate synthetase: snapshots along the reaction pathway., Thoden JB, Huang X, Raushel FM, Holden HM, Biochemistry 1999 Dec 7;38(49):16158-66. PMID:10587438
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1002 Kb) [Save to disk]
  • Biological Unit Coordinates (1cs0.pdb1.gz) 986 Kb
  • Biological Unit Coordinates (1cs0.pdb2.gz) 261 Kb
  • Biological Unit Coordinates (1cs0.pdb3.gz) 256 Kb
  • Biological Unit Coordinates (1cs0.pdb4.gz) 261 Kb
  • Biological Unit Coordinates (1cs0.pdb5.gz) 262 Kb
  • LPC: Ligand-Protein Contacts for 1CS0
  • CSU: Contacts of Structural Units for 1CS0
  • Likely Quarternary Molecular Structure file(s) for 1CS0
  • Retrieve 1CS0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CS0 from S2C, [Save to disk]
  • View 1CS0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CS0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CS0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cs0a3, region A:1-127 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0a5, region A:128-402 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0a1, region A:403-555 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0a4, region A:556-676 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0a6, region A:677-935 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0a2, region A:936-1073 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0b2, region B:153-380 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0b1, region B:2-152 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0c3, region C:1-127 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0c5, region C:128-402 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0c1, region C:403-555 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0c4, region C:556-676 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0c6, region C:677-935 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0c2, region C:936-1073 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0d2, region D:153-380 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0d1, region D:2-152 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0e3, region E:1-127 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0e5, region E:128-402 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0e1, region E:403-555 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0e4, region E:556-676 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0e6, region E:677-935 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0e2, region E:936-1073 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0f2, region F:153-380 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0f1, region F:2-152 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0g3, region G:1-127 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0g5, region G:128-402 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0g1, region G:403-555 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0g4, region G:556-676 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0g6, region G:677-935 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0g2, region G:936-1073 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0h2, region H:153-380 [Jmol] [rasmolscript] [script source]
        - Domain d1cs0h1, region H:2-152 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cs0_F] [1cs0] [1cs0_H] [1cs0_E] [1cs0_D] [1cs0_B] [1cs0_C] [1cs0_G] [1cs0_A]
  • SWISS-PROT database: [P0A6F1] [P00968]
  • Domain organization of [CARA_ECOLI] [CARB_ECOLI] by SWISSPFAM
  • Domains found in 1CS0: [CPSase_L_D3] [CPSase_sm_chain] [MGS ] by SMART
  • Other resources with information on 1CS0
  • Community annotation for 1CS0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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