1CV7 Luminescent Protein date Aug 23, 1999
title Crystal Structure Of Enhanced Cyan-Emission Variant Of Gfp
authors P.O'Brien, M.A.Elsliger, K.Kallio, S.J.Remington
compound source
Molecule: Green Fluorescent Protein
Chain: A
Synonym: Cyan-Emission Variant Of Gfp
Engineered: Yes
Mutation: Yes
Organism_scientific: Aequorea Victoria
Organism_taxid: 6100
Organ: Photogenic Organ
Tissue: Circumoral Ring Canal
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109 (De3)
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: Plasmid
Other_details: The N-Terminal His-Tag Has Been Removed
symmetry Space Group: P 21 21 21
R_factor 0.186 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.052 62.781 66.830 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CRF enzyme
related structures by homologous chain: 1B9C, 1YFP
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1cv7.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1CV7
  • CSU: Contacts of Structural Units for 1CV7
  • Likely Quarternary Molecular Structure file(s) for 1CV7
  • Structure Factors (58 Kb)
  • Retrieve 1CV7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CV7 from S2C, [Save to disk]
  • Re-refined 1cv7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CV7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CV7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CV7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cv7a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1cv7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cv7] [1cv7_A]
  • SWISS-PROT database: [P42212]
  • Domain organization of [GFP_AEQVI] by SWISSPFAM
  • Other resources with information on 1CV7
  • Community annotation for 1CV7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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