1D03 Electron Transport date Sep 08, 1999
title Refined Structures Of Oxidized Flavodoxin From Anacystis Nid
authors C.L.Drennan, K.A.Pattridge, C.H.Weber, A.L.Metzger, D.M.Hoover, M
compound source
Molecule: Flavodoxin
Chain: A
Engineered: Yes
Mutation: Yes
Other_details: Oxidized
Organism_scientific: Synechococcus Elongatus
Organism_taxid: 1140
Strain: Pcc 7942
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: W1485
Expression_system_plasmid: Pkk233-2-Anfld
symmetry Space Group: P 21 21 21
R_factor 0.149 R_Free 0.172
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.300 59.150 94.440 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand FMN enzyme
related structures by homologous chain: 1CZL, 1CZO
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


  • Primary referenceRefined structures of oxidized flavodoxin from Anacystis nidulans., Drennan CL, Pattridge KA, Weber CH, Metzger AL, Hoover DM, Ludwig ML, J Mol Biol 1999 Dec 3;294(3):711-24. PMID:10610791
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (1d03.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 1D03
  • CSU: Contacts of Structural Units for 1D03
  • Likely Quarternary Molecular Structure file(s) for 1D03
  • Retrieve 1D03 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D03 from S2C, [Save to disk]
  • View 1D03 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1D03
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1D03, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1d03a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d03] [1d03_A]
  • SWISS-PROT database: [P10340]
  • Domain organization of [FLAV_SYNE7] by SWISSPFAM
  • Other resources with information on 1D03
  • Community annotation for 1D03 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science