1D9K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG, NDG enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, G


D, H


F, B


Primary referenceThe crystal structure of a T cell receptor in complex with peptide and MHC class II., Reinherz EL, Tan K, Tang L, Kern P, Liu J, Xiong Y, Hussey RE, Smolyar A, Hare B, Zhang R, Joachimiak A, Chang HC, Wagner G, Wang J, Science 1999 Dec 3;286(5446):1913-21. PMID:10583947
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk]
  • Biological Unit Coordinates (1d9k.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (1d9k.pdb2.gz) 68 Kb
  • Biological Unit Coordinates (1d9k.pdb3.gz) 39 Kb
  • Biological Unit Coordinates (1d9k.pdb4.gz) 67 Kb
  • Biological Unit Coordinates (1d9k.pdb5.gz) 101 Kb
  • Biological Unit Coordinates (1d9k.pdb6.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 1D9K
  • CSU: Contacts of Structural Units for 1D9K
  • Likely Quarternary Molecular Structure file(s) for 1D9K
  • Structure Factors (414 Kb)
  • Retrieve 1D9K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D9K from S2C, [Save to disk]
  • Re-refined 1d9k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1D9K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d9k] [1d9k_A] [1d9k_B] [1d9k_C] [1d9k_D] [1d9k_E] [1d9k_F] [1d9k_G] [1d9k_H] [1d9k_P] [1d9k_Q]
  • SWISS-PROT database: [P01910] [P06343] [P01739] [P04213]
  • Domains found in 1D9K: [IGc1] [IGv] [MHC_II_alpha] [MHC_II_beta ] by SMART

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