1DDH		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component B
Primary reference	Three-dimensional structure of H-2Dd complexed with an immunodominant peptide from human immunodeficiency virus envelope glycoprotein 120., Li H, Natarajan K, Malchiodi EL, Margulies DH, Mariuzza RA, J Mol Biol 1998;283(1):179-91. PMID:9761682

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (1ddh.pdb1.gz) 60 Kb CSU: Contacts of Structural Units for 1DDH Likely Quarternary Molecular Structure file(s) for 1DDH Structure Factors (59 Kb) Retrieve 1DDH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DDH from S2C, [Save to disk] Re-refined 1ddh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1DDH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ddh] [1ddh_A] [1ddh_B] [1ddh_P] SWISS-PROT database: [P01887] [P04582] [P01900] Domain found in 1DDH: [IGc1 ] by SMART

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