1DGS		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AMP, ZN	enzyme
note	1DGS (Molecule of the Month:pdb55)
related structures	by homologous chain: 1V9P
Gene Ontology	Chain Function Process Component B, A
Primary reference	Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications., Lee JY, Chang C, Song HK, Moon J, Yang JK, Kim HK, Kwon ST, Suh SW, EMBO J 2000 Mar 1;19(5):1119-29. PMID:10698952

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk] Biological Unit Coordinates (1dgs.pdb1.gz) 98 Kb Biological Unit Coordinates (1dgs.pdb2.gz) 98 Kb LPC: Ligand-Protein Contacts for 1DGS CSU: Contacts of Structural Units for 1DGS Likely Quarternary Molecular Structure file(s) for 1DGS Structure Factors (291 Kb) Retrieve 1DGS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DGS from S2C, [Save to disk] Re-refined 1dgs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1DGS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dgs] [1dgs_A] [1dgs_B] SWISS-PROT database: [Q9ZHI0] Domains found in 1DGS: [BRCT] [HhH1] [LIGANc ] by SMART

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