1DYM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG, PCA enzyme
related structures by homologous chain: 1OJI, 1OJK
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the family 7 endoglucanase I (Cel7B) from Humicola insolens at 2.2 A resolution and identification of the catalytic nucleophile by trapping of the covalent glycosyl-enzyme intermediate., MacKenzie LF, Sulzenbacher G, Divne C, Jones TA, Woldike HF, Schulein M, Withers SG, Davies GJ, Biochem J. 1998 Oct 15;335 ( Pt 2):409-16. PMID:9761741
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1dym.pdb1.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 1DYM
  • CSU: Contacts of Structural Units for 1DYM
  • Likely Quarternary Molecular Structure file(s) for 1DYM
  • Structure Factors (308 Kb)
  • Retrieve 1DYM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DYM from S2C, [Save to disk]
  • Re-refined 1dym structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1DYM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dym] [1dym_A]
  • SWISS-PROT database: [P56680]

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