1F17	Oxidoreductase	date	May 18, 2000
title	L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With Nadh
authors	J.J.Barycki, L.K.O'Brien, A.W.Strauss, L.J.Banaszak
compound		source
Molecule: L-3-Hydroxyacyl-Coa Dehydrogenase Chain: A, B Synonym: Schad Ec: 1.1.1.35 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Heart Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pet28 Other_details: Protein Was Expressed With A C-Terminal Hexa Histidine Tag.
symmetry	Space Group: P 21 21 21	R_factor 0.196 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.190 86.440 168.600 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	NAI	enzyme	Oxidoreductase E.C.1.1.1.35 BRENDA
related structures	by homologous chain: 1F14, 1IL0
Gene Ontology	Chain Function Process Component A, B
Primary reference	Sequestration of the active site by interdomain shifting. Crystallographic and spectroscopic evidence for distinct conformations of L-3-hydroxyacyl-CoA dehydrogenase., Barycki JJ, O'Brien LK, Strauss AW, Banaszak LJ, J Biol Chem 2000 Sep 1;275(35):27186-96. PMID:10840044

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk] Biological Unit Coordinates (1f17.pdb1.gz) 95 Kb LPC: Ligand-Protein Contacts for 1F17 CSU: Contacts of Structural Units for 1F17 Likely Quarternary Molecular Structure file(s) for 1F17 Structure Factors (264 Kb) Retrieve 1F17 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1F17 from S2C, [Save to disk] Re-refined 1f17 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1F17 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1F17

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1F17, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f17a2, region A:12-203 [Jmol] [rasmolscript] [script source]     - Domain d1f17a1, region A:204-304 [Jmol] [rasmolscript] [script source]     - Domain d1f17b2, region B:12-203 [Jmol] [rasmolscript] [script source]     - Domain d1f17b1, region B:204-302 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1f17_A] [1f17] [1f17_B] SWISS-PROT database: [Q16836] Domain organization of [HCDH_HUMAN] by SWISSPFAM

Other resources with information on 1F17

Community annotation for 1F17 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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