1F52 CRYSTAL STRUCTURE OF GLUTAMINE SYNTHETASE FROM SALMONELLA TYPHIMURIUM CO-CRYSTALLIZED WITH ADP date
authors Gill, H.S., Pfluegl, G.M.U., Eisenberg, D.
compound source
symmetry
R_factor
R_Free 0.2570000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.49
ligand ADP, MN, MPD enzyme
related structures by homologous chain: 1F1H
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceThe crystal structure of phosphinothricin in the active site of glutamine synthetase illuminates the mechanism of enzymatic inhibition., Gill HS, Eisenberg D, Biochemistry 2001 Feb 20;40(7):1903-12. PMID:11329256
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (973 Kb) [Save to disk]
  • Biological Unit Coordinates (1f52.pdb1.gz) 958 Kb
  • LPC: Ligand-Protein Contacts for 1F52
  • CSU: Contacts of Structural Units for 1F52
  • Likely Quarternary Molecular Structure file(s) for 1F52
  • Structure Factors (1912 Kb)
  • Retrieve 1F52 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F52 from S2C, [Save to disk]
  • Re-refined 1f52 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1F52 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1F52
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1F52, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f52a1, region A:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52a2, region A:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52b1, region B:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52b2, region B:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52c1, region C:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52c2, region C:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52d1, region D:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52d2, region D:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52e1, region E:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52e2, region E:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52f1, region F:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52f2, region F:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52g1, region G:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52g2, region G:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52h1, region H:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52h2, region H:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52i1, region I:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52i2, region I:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52j1, region J:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52j2, region J:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52k1, region K:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52k2, region K:101-468 [Jmol] [rasmolscript] [script source]
        - Domain d1f52l1, region L:1-100 [Jmol] [rasmolscript] [script source]
        - Domain d1f52l2, region L:101-468 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f52_G] [1f52_K] [1f52_L] [1f52_J] [1f52_H] [1f52_A] [1f52_F] [1f52_C] [1f52_D] [1f52_E] [1f52_B] [1f52] [1f52_I]
  • SWISS-PROT database: [P0A1P6]
  • Domain organization of [GLNA_SALTY] by SWISSPFAM
  • Domain found in 1F52: [Gln-synt_C ] by SMART
  • Other resources with information on 1F52
  • Community annotation for 1F52 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science