1GMZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IPA enzyme
related structures by homologous chain: 1PC9, 1TP2, 1Y38
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceThe structure of the D49 phospholipase A2 piratoxin III from Bothrops pirajai reveals unprecedented structural displacement of the calcium-binding loop: possiblerelationship to cooperative substrate binding., Rigden DJ, Hwa LW, Marangoni S, Toyama MH, Polikarpov I, Acta Crystallogr D Biol Crystallogr 2003 Feb;59(Pt 2):255-62. PMID:12554936
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1gmz.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (1gmz.pdb2.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 1GMZ
  • CSU: Contacts of Structural Units for 1GMZ
  • Likely Quarternary Molecular Structure file(s) for 1GMZ
  • Structure Factors (48 Kb)
  • Retrieve 1GMZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GMZ from S2C, [Save to disk]
  • Re-refined 1gmz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1GMZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gmz] [1gmz_A] [1gmz_B]
  • SWISS-PROT database: [P58464]
  • Domain found in 1GMZ: [PA2c ] by SMART

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