1GYK		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, CDG	enzyme
related structures	by homologous chain: 1LGN, 1SAC
Gene Ontology	Chain Function Process Component B, A, C, D, E negative regulation of monoc...
Primary reference	The structures of crystalline complexes of human serum amyloid P component with its carbohydrate ligand, the cyclic pyruvate acetal of galactose., Thompson D, Pepys MB, Tickle I, Wood S, J Mol Biol 2002 Jul 26;320(5):1081-6. PMID:12126626

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk] Biological Unit Coordinates (1gyk.pdb1.gz) 164 Kb LPC: Ligand-Protein Contacts for 1GYK CSU: Contacts of Structural Units for 1GYK Likely Quarternary Molecular Structure file(s) for 1GYK Structure Factors (485 Kb) Retrieve 1GYK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GYK from S2C, [Save to disk] Re-refined 1gyk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1GYK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gyk_A] [1gyk] [1gyk_B] [1gyk_C] [1gyk_D] [1gyk_E] SWISS-PROT database: [P02743] Belongs to the pentraxin (pentraxin) family according to TCDB. Domain found in 1GYK: [PTX ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---