1HCK Protein Kinase date Jun 03, 1996
title Human Cyclin-Dependent Kinase 2
authors U.Schulze-Gahmen, H.L.De Bondt, S.H.Kim
compound source
Molecule: Human Cyclin-Dependent Kinase 2
Chain: A
Synonym: Cdk2
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Sf9
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_plasmid: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.820 72.660 54.070 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand ATP, MG enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1H0V, 2BHE
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution crystal structures of human cyclin-dependent kinase 2 with and without ATP: bound waters and natural ligand as guides for inhibitor design., Schulze-Gahmen U, De Bondt HL, Kim SH, J Med Chem 1996 Nov 8;39(23):4540-6. PMID:8917641
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1hck.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1HCK
  • CSU: Contacts of Structural Units for 1HCK
  • Likely Quarternary Molecular Structure file(s) for 1HCK
  • Structure Factors (182 Kb)
  • Retrieve 1HCK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HCK from S2C, [Save to disk]
  • Re-refined 1hck structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HCK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HCK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HCK, from MSDmotif at EBI
  • Genome occurence of 1HCK's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hck__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hck_A] [1hck]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 1HCK: [S_TKc ] by SMART
  • Other resources with information on 1HCK
  • Community annotation for 1HCK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1HCK from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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