1HFC Metalloprotease date Sep 13, 1994
title 1.56 Angstrom Structure Of Mature Truncated Human Fibroblast Collagenase
authors J.C.Spurlino, D.L.Smith
compound source
Molecule: Fibroblast Collagenase
Chain: A
Ec: 3.4.24.7
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.174 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.210 44.570 36.280 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand CA, PLH, ZN BindingDB enzyme Hydrolase E.C.3.4.24.7 BRENDA
related structures by homologous chain: 1HY7
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference1.56 A structure of mature truncated human fibroblast collagenase., Spurlino JC, Smallwood AM, Carlton DD, Banks TM, Vavra KJ, Johnson JS, Cook ER, Falvo J, Wahl RC, Pulvino TA, et al., Proteins 1994 Jun;19(2):98-109. PMID:8090713
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (1hfc.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 1HFC
  • CSU: Contacts of Structural Units for 1HFC
  • Likely Quarternary Molecular Structure file(s) for 1HFC
  • Retrieve 1HFC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HFC from S2C, [Save to disk]
  • View 1HFC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HFC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HFC, from MSDmotif at EBI
  • Genome occurence of 1HFC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hfc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hfc] [1hfc_A]
  • SWISS-PROT database: [P03956]
  • Domain organization of [MMP1_HUMAN] by SWISSPFAM
  • Domain found in 1HFC: [ZnMc ] by SMART
  • Other resources with information on 1HFC
  • Community annotation for 1HFC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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