1HHP Hydrolase(Acid Proteinase) date May 27, 1992
title The Three-Dimensional Structure Of The Aspartyl Protease Fro Isolate Bru
authors S.Spinelli, P.M.Alzari
compound source
Molecule: Unliganded Hiv-1 Protease
Chain: A
Engineered: Yes
Organism_scientific: Human Immunodeficiency Virus Type 1 (B Isolate);
Organism_taxid: 11686
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.190 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.200 50.200 106.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
related structures by homologous chain: 1RQ9, 3PHV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe three-dimensional structure of the aspartyl protease from the HIV-1 isolate BRU., Spinelli S, Liu QZ, Alzari PM, Hirel PH, Poljak RJ, Biochimie 1991 Nov;73(11):1391-6. PMID:1799632
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (1hhp.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 1HHP
  • Likely Quarternary Molecular Structure file(s) for 1HHP
  • Retrieve 1HHP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HHP from S2C, [Save to disk]
  • View 1HHP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HHP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HHP, from MSDmotif at EBI
  • Genome occurence of 1HHP's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hhp__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hhp] [1hhp_A]
  • SWISS-PROT database: [P03367]
  • Domain organization of [POL_HV1BR] by SWISSPFAM
  • Other resources with information on 1HHP
  • Community annotation for 1HHP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1HHP from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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