1HHS RNA dependent RNA polymerase from dsRNA bacteriophage phi6 date
authors Grimes, J.M., Butcher, S.J., Makeyev, E.V., Bamford, D.H., Stuart, D.I.
compound source
symmetry
R_factor
R_Free 0.2487
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand MN enzyme
related structures by homologous chain: 1UVJ, 1UVM
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • RNA-directed 5'-3' RNA polym...


  • Primary referenceA mechanism for initiating RNA-dependent RNA polymerization., Butcher SJ, Grimes JM, Makeyev EV, Bamford DH, Stuart DI, Nature 2001 Mar 8;410(6825):235-40. PMID:11242087
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (381 Kb) [Save to disk]
  • Biological Unit Coordinates (1hhs.pdb1.gz) 128 Kb
  • Biological Unit Coordinates (1hhs.pdb2.gz) 129 Kb
  • Biological Unit Coordinates (1hhs.pdb3.gz) 128 Kb
  • LPC: Ligand-Protein Contacts for 1HHS
  • CSU: Contacts of Structural Units for 1HHS
  • Likely Quarternary Molecular Structure file(s) for 1HHS
  • Structure Factors (1342 Kb)
  • Retrieve 1HHS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HHS from S2C, [Save to disk]
  • Re-refined 1hhs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1HHS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HHS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HHS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hhsa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hhsb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1hhsc_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hhs_A] [1hhs_B] [1hhs_C] [1hhs]
  • SWISS-PROT database: [P11124]
  • Domain organization of [RDRP_BPPH6] by SWISSPFAM
  • Other resources with information on 1HHS
  • Community annotation for 1HHS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science