1HTA Histone date Mar 18, 1998
title Crystal Structure Of The Histone Hmfa From Methanothermus Fe
authors K.Decanniere, K.Sandman, J.N.Reeve, U.Heinemann
compound source
Molecule: Histone Hmfa
Chain: A
Engineered: Yes
Organism_scientific: Methanothermus Fervidus
Organism_taxid: 2180
Gene: Hmfa
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm105
Expression_system_plasmid: Pks354
Expression_system_gene: Hmfb
symmetry Space Group: P 42 21 2
R_factor 0.198 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.700 41.700 81.980 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand CL enzyme
related structures by homologous chain: 1A7W, 1B67, 1KU5
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of recombinant histones HMfA and HMfB from the hyperthermophilic archaeon Methanothermus fervidus., Decanniere K, Babu AM, Sandman K, Reeve JN, Heinemann U, J Mol Biol. 2000 Oct 13;303(1):35-47. PMID:11021968
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (1hta.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 1HTA
  • CSU: Contacts of Structural Units for 1HTA
  • Likely Quarternary Molecular Structure file(s) for 1HTA
  • Retrieve 1HTA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HTA from S2C, [Save to disk]
  • View 1HTA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HTA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HTA, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hta__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hta] [1hta_A]
  • SWISS-PROT database: [P48781]
  • Domain organization of [HMFA_METFE] by SWISSPFAM
  • Other resources with information on 1HTA
  • Community annotation for 1HTA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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