1HZH	Immune System	date	Jan 24, 2001
title	Crystal Structure Of The Intact Human Igg B12 With Broad And Activity Against Primary Hiv-1 Isolates: A Template For Hiv Design
authors	E.O.Saphire, D.R.Burton, I.A.Wilson
compound		source
Molecule: Immunoglobulin Heavy Chain Chain: H, K Synonym: Igg,Immunoglobulin Gamma-1 Heavy Chain Nie Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human, Human Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
Molecule: Immunoglobulin Light Chain,Uncharacterized Protei Chain: L, M Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human, Human Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
symmetry	Space Group: H 3 2	R_factor 0.229 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 271.320 271.320 175.180 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	BMA, FUC, GAL, MAN, NAG	enzyme
note	1HZH (Molecule of the Month:pdb21)
related structures	by homologous chain: 1DEE, 1DN2, 1I1C, 1YYL
Gene Ontology	Chain Function Process Component H, K M, L
Primary reference	Crystal structure of a neutralizing human IGG against HIV-1: a template for vaccine design., Saphire EO, Parren PW, Pantophlet R, Zwick MB, Morris GM, Rudd PM, Dwek RA, Stanfield RL, Burton DR, Wilson IA, Science 2001 Aug 10;293(5532):1155-9. PMID:11498595

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (215 Kb) [Save to disk] Biological Unit Coordinates (1hzh.pdb1.gz) 207 Kb LPC: Ligand-Protein Contacts for 1HZH CSU: Contacts of Structural Units for 1HZH Likely Quarternary Molecular Structure file(s) for 1HZH Structure Factors (1110 Kb) Retrieve 1HZH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HZH from S2C, [Save to disk] Re-refined 1hzh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1HZH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HZH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HZH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hzhh1, region H:1-113 [Jmol] [rasmolscript] [script source]     - Domain d1hzhh2, region H:114-235 [Jmol] [rasmolscript] [script source]     - Domain d1hzhh3, region H:236-359 [Jmol] [rasmolscript] [script source]     - Domain d1hzhh4, region H:360-478 [Jmol] [rasmolscript] [script source]     - Domain d1hzhk1, region K:1-113 [Jmol] [rasmolscript] [script source]     - Domain d1hzhk2, region K:114-235 [Jmol] [rasmolscript] [script source]     - Domain d1hzhk3, region K:239-359 [Jmol] [rasmolscript] [script source]     - Domain d1hzhk4, region K:360-475 [Jmol] [rasmolscript] [script source]     - Domain d1hzhl1, region L:1-107 [Jmol] [rasmolscript] [script source]     - Domain d1hzhl2, region L:108-214 [Jmol] [rasmolscript] [script source]     - Domain d1hzhm1, region M:1-107 [Jmol] [rasmolscript] [script source]     - Domain d1hzhm2, region M:108-214 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hzh_L] [1hzh_K] [1hzh_M] [1hzh] [1hzh_H] SWISS-PROT database: [P01857] Domain organization of [IGHG1_HUMAN] by SWISSPFAM Domains found in 1HZH: [IG_like] [IGv ] by SMART

Other resources with information on 1HZH

Community annotation for 1HZH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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