1IAY	Lyase	date	Mar 24, 2001
title	Crystal Structure Of Acc Synthase Complexed With Cofactor Pl Inhibitor Avg
authors	Q.Huai, Y.Xia, Y.Chen, B.Callahan, N.Li, H.Ke
compound		source
Molecule: 1-Aminocyclopropane-1-Carboxylate Synthase 2 Chain: A Fragment: Residues 11-438 Synonym: Acc Synthase 2 Ec: 4.4.1.14 Engineered: Yes		Organism_scientific: Solanum Lycopersicum Organism_taxid: 4081 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11d
symmetry	Space Group: P 62 2 2	R_factor 0.215 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 123.100 123.100 106.800 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	AVG, PLP	enzyme	Lyase E.C.4.4.1.14 BRENDA
related structures	by homologous chain: 1IAX
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structures of 1-aminocyclopropane-1-carboxylate (ACC) synthase in complex with aminoethoxyvinylglycine and pyridoxal-5'-phosphate provide new insight into catalytic mechanisms., Huai Q, Xia Y, Chen Y, Callahan B, Li N, Ke H, J Biol Chem 2001 Oct 12;276(41):38210-6. PMID:11431475

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (1iay.pdb1.gz) 137 Kb LPC: Ligand-Protein Contacts for 1IAY CSU: Contacts of Structural Units for 1IAY Likely Quarternary Molecular Structure file(s) for 1IAY Structure Factors (167 Kb) Retrieve 1IAY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1IAY from S2C, [Save to disk] Re-refined 1iay structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1IAY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1IAY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1IAY, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1iaya_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1iay_A] [1iay] SWISS-PROT database: [P18485] Domain organization of [1A12_SOLLC] by SWISSPFAM

Other resources with information on 1IAY

Community annotation for 1IAY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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