1ICV Oxidoreductase date Apr 02, 2001
title The Structure Of Escherichia Coli Nitroreductase Complexed With Nicotinic Acid
authors A.L.Lovering, E.I.Hyde, P.F.Searle, S.A.White
compound source
Molecule: Oxygen-Insensitive Nad(P)H Nitroreductase
Chain: A, B, C, D
Synonym: Dihydropteridine Reductase
Ec: 1.6.99.7
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Nfsb
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11c
symmetry Space Group: P 21 21 21
R_factor 0.198 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.740 119.570 143.610 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand FMN, MSE, NIO enzyme Oxidoreductase E.C.1.6.99.7 BRENDA
related structures by homologous chain: 1DS7, 1OON
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe structure of Escherichia coli nitroreductase complexed with nicotinic acid: three crystal forms at 1.7 A, 1.8 A and 2.4 A resolution., Lovering AL, Hyde EI, Searle PF, White SA, J Mol Biol 2001 May 25;309(1):203-13. PMID:11491290
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (1icv.pdb1.gz) 77 Kb
  • Biological Unit Coordinates (1icv.pdb2.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 1ICV
  • CSU: Contacts of Structural Units for 1ICV
  • Likely Quarternary Molecular Structure file(s) for 1ICV
  • Retrieve 1ICV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ICV from S2C, [Save to disk]
  • View 1ICV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ICV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ICV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1icva_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1icvb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1icvc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1icvd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1icv_D] [1icv] [1icv_B] [1icv_C] [1icv_A]
  • SWISS-PROT database: [P38489]
  • Domain organization of [NFNB_ECOLI] by SWISSPFAM
  • Other resources with information on 1ICV
  • Community annotation for 1ICV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science