1IJ1 GCN4-pVLT Coiled-coil Trimer with Threonine at the d(12) Position date
authors Akey, D.L., Malashkevich, V.N., Kim, P.S.
compound source
symmetry
R_factor
R_Free 0.2780000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.86
ligand ACE, ZN enzyme
related structures by homologous chain: 1GK6, 1IJ0
Primary referenceBuried polar residues in coiled-coil interfaces., Akey DL, Malashkevich VN, Kim PS, Biochemistry 2001 May 29;40(21):6352-60. PMID:11371197
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1ij1.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 1IJ1
  • CSU: Contacts of Structural Units for 1IJ1
  • Likely Quarternary Molecular Structure file(s) for 1IJ1
  • Retrieve 1IJ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IJ1 from S2C, [Save to disk]
    • View 1IJ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1IJ1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IJ1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ij1a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ij1b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ij1c_, region C [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ij1_C] [1ij1_B] [1ij1_A] [1ij1]
  • SWISS-PROT database: [P03069]
  • Domain organization of [GCN4_YEAST] by SWISSPFAM
    • Other resources with information on 1IJ1
  • Community annotation for 1IJ1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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