1INV A SIALIC ACID DERIVED PHOSPHONATE ANALOG INHIBITS DIFFERENT STRAINS OF INFLUENZA VIRUS NEURAMINIDASE WITH DIFFERENT EFFICIENCIES date
authors White, C.L., Janakiraman, M.N., Laver, W.G., Philippon, C., Vasella, A., Air, G.M., Luo, M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand CA, EQP, NAG enzyme
related structures by homologous chain: 1B9V, 1INF
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA sialic acid-derived phosphonate analog inhibits different strains of influenza virus neuraminidase with different efficiencies., White CL, Janakiraman MN, Laver WG, Philippon C, Vasella A, Air GM, Luo M, J Mol Biol 1995 Feb 3;245(5):623-34. PMID:7844831
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (1inv.pdb1.gz) 324 Kb
  • LPC: Ligand-Protein Contacts for 1INV
  • CSU: Contacts of Structural Units for 1INV
  • Likely Quarternary Molecular Structure file(s) for 1INV
  • Structure Factors (128 Kb)
  • Retrieve 1INV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1INV from S2C, [Save to disk]
  • Re-refined 1inv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1INV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1INV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1INV, from MSDmotif at EBI
  • Genome occurence of 1INV's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1inv__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1inv] [1inv_A]
  • SWISS-PROT database: [P03474]
  • Domain organization of [NRAM_INBLE] by SWISSPFAM
    • Other resources with information on 1INV
  • Community annotation for 1INV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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