1INY Hydrolase date Sep 26, 1994
title A Sialic Acid Derived Phosphonate Analog Inhibits Different Influenza Virus Neuraminidase With Different Efficiencies
authors C.L.White, M.N.Janakiraman, W.G.Laver, C.Philippon, A.Vasella, G. M.Luo
compound source
Molecule: Influenza A Subtype N9 Neuraminidase
Chain: A
Ec: 3.2.1.18
Engineered: Yes
Organism_scientific: Influenza A Virus
Organism_taxid: 11320
symmetry Space Group: I 4 3 2
R_factor 0.187 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
184.860 184.860 184.860 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand BMA, CA, EQP, MAN, NAG enzyme Hydrolase E.C.3.2.1.18 BRENDA
related structures by homologous chain: 1NCB, 3NN9
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA sialic acid-derived phosphonate analog inhibits different strains of influenza virus neuraminidase with different efficiencies., White CL, Janakiraman MN, Laver WG, Philippon C, Vasella A, Air GM, Luo M, J Mol Biol 1995 Feb 3;245(5):623-34. PMID:7844831
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (1iny.pdb1.gz) 321 Kb
  • LPC: Ligand-Protein Contacts for 1INY
  • CSU: Contacts of Structural Units for 1INY
  • Likely Quarternary Molecular Structure file(s) for 1INY
  • Structure Factors (129 Kb)
  • Retrieve 1INY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1INY from S2C, [Save to disk]
  • Re-refined 1iny structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1INY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1INY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1INY, from MSDmotif at EBI
  • Genome occurence of 1INY's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1iny__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1iny] [1iny_A]
  • SWISS-PROT database: [P03472]
  • Domain organization of [NRAM_I75A5] by SWISSPFAM
  • Other resources with information on 1INY
  • Community annotation for 1INY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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