1IO1 Structural Protein date Dec 28, 2000
title Crystal Structure Of F41 Fragment Of Flagellin
authors F.A.Samatey, K.Imada, S.Nagashima, F.Vondervisz, T.Kumasaka, M.Yamamoto, K.Namba
compound source
Molecule: Phase 1 Flagellin
Chain: A
Fragment: F41 L-Type (Residues 54-451)
Engineered: Yes
Mutation: Yes
 Organism_scientific: Salmonella Typhimurium
Organism_taxid: 602
Strain: Sjw 1660
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.234 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.750 36.440 118.350 90.00 91.15 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the bacterial flagellar protofilament and implications for a switch for supercoiling., Samatey FA, Imada K, Nagashima S, Vonderviszt F, Kumasaka T, Yamamoto M, Namba K, Nature 2001 Mar 15;410(6826):331-7. PMID:11268201
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (1io1.pdb1.gz) 65 Kb
  • CSU: Contacts of Structural Units for 1IO1
  • Likely Quarternary Molecular Structure file(s) for 1IO1
  • Structure Factors (248 Kb)
  • Retrieve 1IO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IO1 from S2C, [Save to disk]
  • Re-refined 1io1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1IO1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1IO1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IO1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1io1a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1io1] [1io1_A]
  • SWISS-PROT database: [P06179]
  • Domain organization of [FLIC_SALTY] by SWISSPFAM
    • Other resources with information on 1IO1
  • Community annotation for 1IO1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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