1JD2		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	1QQ, AKK, MG, R4K	enzyme
related structures	by homologous chain: 1G0U, 1IRU
Gene Ontology	Chain Function Process Component 1, F A, V proteasome core complex, alp... B, W proteasome core complex, alp... E, Z proteasome core complex, alp... G, 2 proteasome core complex, alp... H, R, O, K I, P endopeptidase activator acti... proteasome core complex, bet... L, S M, T N, U proteasome core complex, bet... Q, J endopeptidase activator acti... proteasome core complex, bet... X, C Y, D
Primary reference	Crystal structure of the 20 S proteasome:TMC-95A complex: a non-covalent proteasome inhibitor., Groll M, Koguchi Y, Huber R, Kohno J, J Mol Biol 2001 Aug 17;311(3):543-8. PMID:11493007

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1049 Kb) [Save to disk] Biological Unit Coordinates (1jd2.pdb1.gz) 1041 Kb LPC: Ligand-Protein Contacts for 1JD2 CSU: Contacts of Structural Units for 1JD2 Likely Quarternary Molecular Structure file(s) for 1JD2 Retrieve 1JD2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JD2 from S2C, [Save to disk]

View 1JD2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jd2] [1jd2_1] [1jd2_2] [1jd2_8] [1jd2_9] [1jd2_A] [1jd2_B] [1jd2_C] [1jd2_D] [1jd2_E] [1jd2_F] [1jd2_G] [1jd2_H] [1jd2_I] [1jd2_J] [1jd2_K] [1jd2_L] [1jd2_M] [1jd2_N] [1jd2_O] [1jd2_P] [1jd2_Q] [1jd2_R] [1jd2_S] [1jd2_T] [1jd2_U] [1jd2_V] [1jd2_W] [1jd2_X] [1jd2_Y] [1jd2_Z] SWISS-PROT database: [P40302] [P23639] [P21242] [P23638] [P32379] [P21243] [P40303] [P23724] [P22141] [P25451] [P30657] [P30656] [P38624] [P25043] Domain found in 1JD2: [Proteasome_A_N ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---