1K1F	Transferase	date	Sep 25, 2001
title	Structure Of The Bcr-Abl Oncoprotein Oligomerization Domain
authors	X.Zhao, S.Ghaffari, H.Lodish, V.N.Malashkevich, P.S.Kim
compound		source
Molecule: Breakpoint Cluster Region Protein Chain: A, B, C, D, E, F, G, H Fragment: Bcr1-72 Ec: 2.7.1.- Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.262 R_Free 0.295
crystal cell	length a length b length c angle alpha angle beta angle gamma 35.988 121.173 60.432 90.00 93.03 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	MSE	enzyme	Transferase E.C.2.7.1 BRENDA
note	1K1F is a representative structure
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G
Primary reference	Structure of the Bcr-Abl oncoprotein oligomerization domain., Zhao X, Ghaffari S, Lodish H, Malashkevich VN, Kim PS, Nat Struct Biol 2002 Feb;9(2):117-20. PMID:11780146

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk] Biological Unit Coordinates (1k1f.pdb1.gz) 51 Kb Biological Unit Coordinates (1k1f.pdb2.gz) 46 Kb LPC: Ligand-Protein Contacts for 1K1F CSU: Contacts of Structural Units for 1K1F Likely Quarternary Molecular Structure file(s) for 1K1F Retrieve 1K1F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1K1F from S2C, [Save to disk]

View 1K1F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1K1F

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1K1F, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1k1fa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1k1fb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1k1fc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1k1fd_, region D [Jmol] [rasmolscript] [script source]     - Domain d1k1fe_, region E [Jmol] [rasmolscript] [script source]     - Domain d1k1ff_, region F [Jmol] [rasmolscript] [script source]     - Domain d1k1fg_, region G [Jmol] [rasmolscript] [script source]     - Domain d1k1fh_, region H [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1k1f_F] [1k1f_E] [1k1f_A] [1k1f_H] [1k1f] [1k1f_C] [1k1f_D] [1k1f_G] [1k1f_B] SWISS-PROT database: [P11274] Domain organization of [BCR_HUMAN] by SWISSPFAM

Other resources with information on 1K1F

Community annotation for 1K1F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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